RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 PFN3P60673 137 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 RAB10P61026 200 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 ELF3P78545 371 aaPredicted RBP2.05□□□□□ -2.08
RIF1-212ENST00000498041 CAV1Q03135 178 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 GABPB1Q06547 395 aaPredicted RBP2.05□□□□□ -2.08
RIF1-212ENST00000498041 BCL2L1Q07817 233 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 NPRL3Q12980 569 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 KIAA0040Q15053 153 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 IRF4Q15306 451 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 TAF1AQ15573 450 aaPredicted RBP2.05□□□□□ -2.08
RIF1-212ENST00000498041 TGIF1Q15583 401 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 ZNF79Q15937 498 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 PDK4Q16654 411 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 ZNF678Q5SXM1 525 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 LPCAT4Q643R3 524 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 ATRAIDQ6UW56 229 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 EPGNQ6UW88 154 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 SBSNQ6UWP8 590 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 ZYG11AQ6WRX3 759 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 TMEM184AQ6ZMB5 413 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 DGAT2L6Q6ZPD8 337 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 PRSS41Q7RTY9 318 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 GOLGA7Q7Z5G4 137 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 SETD3Q86TU7 594 aaPredicted RBP2.05□□□□□ -2.08
RIF1-212ENST00000498041 RALGPS2Q86X27 583 aaPredicted RBP2.05□□□□□ -2.08
RIF1-212ENST00000498041 MSRB3Q8IXL7 192 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 ARHGAP18Q8N392 663 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 ARFGAP2Q8N6H7 521 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 TEX9Q8N6V9 391 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 FAM86B1Q8N7N1 296 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 Q8N9G6 341 aaPredicted RBP2.05□□□□□ -2.08
RIF1-212ENST00000498041 BBOF1Q8ND07 529 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 OR4F6Q8NGB9 312 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 OR5AR1Q8NGP9 310 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 DTX3LQ8TDB6 740 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 BRSK1Q8TDC3 778 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 C2orf15Q8WU43 125 aaKnown RBP2.05□□□□□ -2.08
RIF1-212ENST00000498041 DYDC1Q8WWB3 177 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 OR1E3Q8WZA6 343 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 N4BP2L2Q92802 583 aaPredicted RBP2.05□□□□□ -2.08
RIF1-212ENST00000498041 SMARCD2Q92925 531 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 SLCO4A1Q96BD0 722 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 PHYHIPLQ96FC7 376 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 TSNARE1Q96NA8 513 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 RUFY1Q96T51 708 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 MAPKAP1Q9BPZ7 522 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 ACAT2Q9BWD1 397 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 TSSK1BQ9BXA7 367 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 SPATA16Q9BXB7 569 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 POLR1EQ9GZS1 481 aaKnown RBP2.05□□□□□ -2.08
RIF1-212ENST00000498041 MFSD1Q9H3U5 465 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 RHOJQ9H4E5 214 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 IKZF5Q9H5V7 419 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 ZNF385DQ9H6B1 395 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 NMRAL1Q9HBL8 299 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 ZFP14Q9HCL3 533 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 SLC40A1Q9NP59 571 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 MID1IP1Q9NPA3 183 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 MED4Q9NPJ6 270 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 ESM1Q9NQ30 184 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 SAR1AQ9NR31 198 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 HOMER3Q9NSC5 361 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 ANAPC11Q9NYG5 84 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 TMEM9Q9P0T7 183 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 SLC22A14Q9Y267 594 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 ACOT9Q9Y305 439 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 RNF115Q9Y4L5 304 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 NEUROG3Q9Y4Z2 214 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 FADS3Q9Y5Q0 445 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 V9GYQ6 96 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 ANKRD17O75179 2603 aaKnown RBP2.05□□□□□ -2.08
RIF1-212ENST00000498041 CHD9Q3L8U1 2897 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 RAI1Q7Z5J4 1906 aaPredicted RBP2.05□□□□□ -2.08
RIF1-212ENST00000498041 BRWD1Q9NSI6 2320 aa2.05□□□□□ -2.08
RIF1-212ENST00000498041 IGKV1-8A0A0C4DH67 115 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 GLYATL1P3A0A0U1RQE8 302 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 IQANK1A0A1B0GTG1 560 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 A0A1W2PPV9 198 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 SLC5A10A0PJK1 596 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 HEATR9A2RTY3 570 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 E7EQ34 232 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 BTN3A3O00478 584 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 NCKAP5O14513 1909 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 NME2P1O60361 137 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 GOSR1O95249 250 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 ECDO95905 644 aaPredicted RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 IGSF6O95976 241 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 FAM107AO95990 144 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 PDYNP01213 254 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 IGHV4-34P06331 123 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 CAPN1P07384 714 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 P0C879 139 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 NEFHP12036 1026 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 ADRB3P13945 408 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 NQO1P15559 274 aaKnown RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 XRCC1P18887 633 aaPredicted RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 NCF2P19878 526 aaPredicted RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 TCN1P20061 433 aaPredicted RBP2.04□□□□□ -2.08
RIF1-212ENST00000498041 IGFBP5P24593 272 aa2.04□□□□□ -2.08
RIF1-212ENST00000498041 GNPDA1P46926 289 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms