RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 TRMT112Q9UI30 125 aaKnown RBP2□□□□□ -2.09
PSPC1-205ENST00000497722 IGKV1D-13A0A0B4J2D9 117 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 IGHV3-66A0A0C4DH42 116 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 PLAC8L1A1L4L8 177 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 TMEM150BA6NC51 233 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 TMEM50AO95807 157 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 C6orf47O95873 294 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 IGLV2-23P01705 113 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 RHOXF2BP0C7M4 288 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 IGKV1-13P0DP09 117 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 EIF2S2P20042 333 aaKnown RBP1.99□□□□□ -2.09
PSPC1-205ENST00000497722 OMGP23515 440 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 CDKN1BP46527 198 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 ACTG2P63267 376 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 ARG2P78540 354 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 MRPS22P82650 360 aaKnown RBP1.99□□□□□ -2.09
PSPC1-205ENST00000497722 RSPO1Q2MKA7 263 aaPredicted RBP1.99□□□□□ -2.09
PSPC1-205ENST00000497722 LY6G6FQ5SQ64 297 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 THEM4Q5T1C6 240 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 FBXW9Q5XUX1 488 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 FAM86B1Q8N7N1 296 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 OR10G4Q8NGN3 311 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 OR8J1Q8NGP2 316 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 PIBF1Q8WXW3 757 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 TMEM54Q969K7 222 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 FBXO32Q969P5 355 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 PIK3IP1Q96FE7 263 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 NT5C3AQ9H0P0 336 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 LINC00597Q9H2U6 94 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 UGT1A7Q9HAW7 530 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 UGT1A10Q9HAW8 530 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 UGT1A8Q9HAW9 530 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 SLC40A1Q9NP59 571 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 HYPKQ9NX55 129 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 PSMC3IPQ9P2W1 217 aaPredicted RBP1.99□□□□□ -2.09
PSPC1-205ENST00000497722 UVRAGQ9P2Y5 699 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 ZNF639Q9UID6 485 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 GOLT1BQ9Y3E0 138 aa1.99□□□□□ -2.09
PSPC1-205ENST00000497722 CEMIPQ8WUJ3 1361 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 IGHV5-51A0A0C4DH38 117 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 SMCO2A6NFE2 343 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 SERPINE3A8MV23 424 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 ERVV-1B6SEH8 477 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 CDC7O00311 574 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 FOXE1O00358 373 aaPredicted RBP1.98□□□□□ -2.09
PSPC1-205ENST00000497722 AIM2O14862 343 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 BET1O15155 118 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 WBP4O75554 376 aaKnown RBP1.98□□□□□ -2.09
PSPC1-205ENST00000497722 CLIC3O95833 236 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 HLA-DPB1P04440 258 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 ZNF24P17028 368 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 CEACAM6P40199 344 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 VHLP40337 213 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 CDKN2BP42772 138 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 CX3CR1P49238 355 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 ATP5IP56385 69 aaPredicted RBP1.98□□□□□ -2.09
PSPC1-205ENST00000497722 DDX39BQ13838 428 aaKnown RBP1.98□□□□□ -2.09
PSPC1-205ENST00000497722 SHHQ15465 462 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 ZNF77Q15935 545 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 VPS26BQ4G0F5 336 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 PTPN20Q4JDL3 420 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 ANKRD26P1Q6NSI1 321 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 LYPD2Q6UXB3 125 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 FAM92BQ6ZTR7 304 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 EGFL6Q8IUX8 553 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 PDIK1LQ8N165 341 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 OR13C2Q8NGS9 318 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 SLC7A13Q8TCU3 470 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 FRZBQ92765 325 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 CCDC126Q96EE4 140 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 C12orf42Q96LP6 360 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 ZNF382Q96SR6 550 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 NPY6RQ99463 290 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 FAIM2Q9BWQ8 316 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 SLC25A2Q9BXI2 301 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 PKIBQ9C010 78 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 ISYNA1Q9NPH2 558 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 CTNNA3Q9UI47 895 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 F11RQ9Y624 299 aaKnown RBP1.98□□□□□ -2.09
PSPC1-205ENST00000497722 CARMIL3Q8ND23 1372 aa1.98□□□□□ -2.09
PSPC1-205ENST00000497722 ATP10AO60312 1499 aa1.97□□□□□ -2.09
PSPC1-205ENST00000497722 TRAV39A0A0B4J263 110 aa1.97□□□□□ -2.09
PSPC1-205ENST00000497722 SMCO3A2RU48 225 aa1.97□□□□□ -2.09
PSPC1-205ENST00000497722 C7orf66A4D0T2 115 aa1.97□□□□□ -2.09
PSPC1-205ENST00000497722 ZNF726A6NNF4 738 aa1.97□□□□□ -2.09
PSPC1-205ENST00000497722 H0Y8G0 127 aa1.97□□□□□ -2.09
PSPC1-205ENST00000497722 LSM1O15116 133 aaKnown RBP1.97□□□□□ -2.09
PSPC1-205ENST00000497722 EEDO75530 441 aaKnown RBP1.97□□□□□ -2.09
PSPC1-205ENST00000497722 PALMO75781 387 aa1.97□□□□□ -2.09
PSPC1-205ENST00000497722 WISP3O95389 354 aaPredicted RBP1.97□□□□□ -2.09
PSPC1-205ENST00000497722 C1orf105O95561 183 aa1.97□□□□□ -2.09
PSPC1-205ENST00000497722 AIFM1O95831 613 aa1.97□□□□□ -2.09
PSPC1-205ENST00000497722 RETP07949 1114 aa1.97□□□□□ -2.09
PSPC1-205ENST00000497722 TROVE2P10155 538 aaKnown RBP eCLIP1.97□□□□□ -2.09
PSPC1-205ENST00000497722 SLC2A3P11169 496 aa1.97□□□□□ -2.09
PSPC1-205ENST00000497722 IGFBP3P17936 291 aaPredicted RBP1.97□□□□□ -2.09
PSPC1-205ENST00000497722 PSMC3P17980 439 aa1.97□□□□□ -2.09
PSPC1-205ENST00000497722 GDI1P31150 447 aa1.97□□□□□ -2.09
PSPC1-205ENST00000497722 HRH1P35367 487 aa1.97□□□□□ -2.09
PSPC1-205ENST00000497722 CRYBB2P43320 205 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms