RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 ELOVL7A1L3X0 281 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 LRP5LA4QPB2 252 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 VSTM5A8MXK1 200 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 LYNX1G3V0Z9 82 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 SLC2A10O95528 541 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 IGF2P01344 180 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 IFNA14P01570 189 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 SERPINA5P05154 406 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 TSPAN19P0C672 248 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 FAM157CP0CG43 387 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 LYNX1P0DP58 116 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 THRBP10828 461 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 CCL2P13500 99 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 ZNF23P17027 643 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 IL2RGP31785 369 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 GLRXP35754 106 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 YAP1P46937 504 aaKnown RBP12.97□□□□□ -0.33
NEK4-206ENST00000496822 RASSF2P50749 326 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 ARMC4Q5T2S8 1044 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 IL17RELQ6ZVW7 336 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 ARPINQ7Z6K5 226 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 VTCN1Q7Z7D3 282 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 MEX3DQ86XN8 651 aaKnown RBP12.97□□□□□ -0.33
NEK4-206ENST00000496822 LIPHQ8WWY8 451 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 PRRC1Q96M27 445 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 CHODLQ9H9P2 273 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 TMEM160Q9NX00 188 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 FBXO9Q9UK97 447 aaPredicted RBP12.97□□□□□ -0.33
NEK4-206ENST00000496822 CDC42EP3Q9UKI2 254 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 FBXL3Q9UKT7 428 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 MED31Q9Y3C7 131 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 SNX13Q9Y5W8 968 aa12.97□□□□□ -0.33
NEK4-206ENST00000496822 COL6A5A8TX70 2615 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 LOC100289279A0A1B0GTE1 492 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 J3KTA2 159 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 M0R233 179 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 SYNGR3O43761 229 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 LMX1BO60663 402 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 ERCC1P07992 297 aaPredicted RBP12.96□□□□□ -0.33
NEK4-206ENST00000496822 FAM157BP0CG42 384 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 ACADSP16219 412 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 TCN1P20061 433 aaPredicted RBP12.96□□□□□ -0.33
NEK4-206ENST00000496822 GIFP27352 417 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 CDAP32320 146 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 EVX1P49640 407 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 NUDT2P50583 147 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 DAP3P51398 398 aaKnown RBP12.96□□□□□ -0.33
NEK4-206ENST00000496822 GALK2Q01415 458 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 FMODQ06828 376 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 LAPTM4AQ15012 233 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 TRIP10Q15642 601 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 PODNL1Q6PEZ8 512 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 HACD2Q6Y1H2 254 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 CCDC121Q6ZUS5 278 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 SLC16A14Q7RTX9 510 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 SLC15A3Q8IY34 581 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 ZNF786Q8N393 782 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 SLC30A7Q8NEW0 376 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 UBASH3BQ8TF42 649 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 HDAC2Q92769 488 aaKnown RBP12.96□□□□□ -0.33
NEK4-206ENST00000496822 NMD3Q96D46 503 aaKnown RBP12.96□□□□□ -0.33
NEK4-206ENST00000496822 OR51B6Q9H340 312 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 RNF121Q9H920 327 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 MAN2C1Q9NTJ4 1040 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 ARL8BQ9NVJ2 186 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 RHCGQ9UBD6 479 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 REV1Q9UBZ9 1251 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 SLC7A8Q9UHI5 535 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 AP3M1Q9Y2T2 418 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 SPEF1Q9Y4P9 236 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 UGT2A1Q9Y4X1 527 aa12.96□□□□□ -0.33
NEK4-206ENST00000496822 NME4O00746 187 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 FFAR1O14842 300 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 LILRA1O75019 489 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 UBOX5O94941 541 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 FARS2O95363 451 aaKnown RBP12.95□□□□□ -0.34
NEK4-206ENST00000496822 MMP7P09237 267 aaPredicted RBP12.95□□□□□ -0.34
NEK4-206ENST00000496822 IFI30P13284 250 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 MAKP20794 623 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 ZNF84P51523 738 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 SLC7A2P52569 658 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 ZNF133P52736 654 aaPredicted RBP12.95□□□□□ -0.34
NEK4-206ENST00000496822 ERVS71-1P61550 626 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 RPS23P62266 143 aaKnown RBP12.95□□□□□ -0.34
NEK4-206ENST00000496822 SELENOWP63302 87 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 LIPEQ05469 1076 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 TOP3AQ13472 1001 aaPredicted RBP12.95□□□□□ -0.34
NEK4-206ENST00000496822 RIN1Q13671 783 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 ELFN2Q5R3F8 820 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 C10orf128Q5T292 105 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 FAM166AQ6J272 317 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 C16orf89Q6UX73 402 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 IGFN1Q86VF2 1251 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 LRRC18Q8N456 261 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 CLDN22Q8N7P3 220 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 ZNF540Q8NDQ6 660 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 HOPXQ9BPY8 73 aaPredicted RBP12.95□□□□□ -0.34
NEK4-206ENST00000496822 BEX2Q9BXY8 128 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 KCNS2Q9ULS6 477 aa12.95□□□□□ -0.34
NEK4-206ENST00000496822 HIF3AQ9Y2N7 669 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms