RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	MAL2	Q969L2	176 aa		6.62	□□□□□ -1.35
NVL-223	ENST00000496393	VPS33A	Q96AX1	596 aa		6.62	□□□□□ -1.35
NVL-223	ENST00000496393	LRR1	Q96L50	414 aa		6.62	□□□□□ -1.35
NVL-223	ENST00000496393	GPA33	Q99795	319 aa		6.62	□□□□□ -1.35
NVL-223	ENST00000496393	MRI1	Q9BV20	369 aa		6.62	□□□□□ -1.35
NVL-223	ENST00000496393	ASPN	Q9BXN1	380 aa		6.62	□□□□□ -1.35
NVL-223	ENST00000496393	C20orf27	Q9GZN8	174 aa		6.62	□□□□□ -1.35
NVL-223	ENST00000496393	PPCS	Q9HAB8	311 aa		6.62	□□□□□ -1.35
NVL-223	ENST00000496393	TMEM38B	Q9NVV0	291 aa		6.62	□□□□□ -1.35
NVL-223	ENST00000496393	ARGLU1	Q9NWB6	273 aa	Predicted RBP	6.62	□□□□□ -1.35
NVL-223	ENST00000496393	NKIRAS2	Q9NYR9	191 aa		6.62	□□□□□ -1.35
NVL-223	ENST00000496393	FBXL3	Q9UKT7	428 aa		6.62	□□□□□ -1.35
NVL-223	ENST00000496393	ZNF232	Q9UNY5	417 aa		6.62	□□□□□ -1.35
NVL-223	ENST00000496393	TANC2	Q9HCD6	1990 aa		6.62	□□□□□ -1.35
NVL-223	ENST00000496393	NBEAL2	Q6ZNJ1	2754 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	TRAV40	A0A0B4J280	105 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	LOC102725191	A0A1B0GVB3	256 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	ADARB2-AS1	A8MUL3	147 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	HOXA3	O43365	443 aa	Predicted RBP	6.61	□□□□□ -1.35
NVL-223	ENST00000496393	ATP8B1	O43520	1251 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	ANP32D	O95626	131 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	IGHM	P01871	453 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	MYZAP	P0CAP1	466 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	ZNF12	P17014	697 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	UCP2	P55851	309 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	ABCE1	P61221	599 aa	Known RBP	6.61	□□□□□ -1.35
NVL-223	ENST00000496393	NCALD	P61601	193 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	GABPB1	Q06547	395 aa	Predicted RBP	6.61	□□□□□ -1.35
NVL-223	ENST00000496393	CEP85L	Q5SZL2	805 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	THEM4	Q5T1C6	240 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	NHLRC1	Q6VVB1	395 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	SLC16A14	Q7RTX9	510 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	PIWIL3	Q7Z3Z3	882 aa	Known RBP	6.61	□□□□□ -1.35
NVL-223	ENST00000496393	ZNF101	Q8IZC7	436 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	PARP8	Q8N3A8	854 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	LRRC18	Q8N456	261 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	SCAI	Q8N9R8	606 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	RBM15B	Q8NDT2	890 aa	Known RBP	6.61	□□□□□ -1.35
NVL-223	ENST00000496393	TMEM54	Q969K7	222 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	UBE2F	Q969M7	185 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	SLC41A3	Q96GZ6	507 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	ZIM3	Q96PE6	472 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	ZBTB18	Q99592	522 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	RSPO3	Q9BXY4	272 aa	Predicted RBP	6.61	□□□□□ -1.35
NVL-223	ENST00000496393	BCL2L14	Q9BZR8	327 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	MMP27	Q9H306	513 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	DENND2D	Q9H6A0	471 aa	Predicted RBP	6.61	□□□□□ -1.35
NVL-223	ENST00000496393	ARMC7	Q9H6L4	198 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	MARCH7	Q9H992	704 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	TPT1P8	Q9HAU6	139 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	MSL2	Q9HCI7	577 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	TCF7L2	Q9NQB0	619 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	PNPO	Q9NVS9	261 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	AIG1	Q9NVV5	245 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	MRPL39	Q9NYK5	338 aa	Known RBP	6.61	□□□□□ -1.35
NVL-223	ENST00000496393	GLTP	Q9NZD2	209 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	EGFL7	Q9UHF1	273 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	TRIM33	Q9UPN9	1127 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	IFT52	Q9Y366	437 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	RAP2C	Q9Y3L5	183 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393	INSIG2	Q9Y5U4	225 aa		6.61	□□□□□ -1.35
NVL-223	ENST00000496393		A0A0G2JPF8	293 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	IQCM	A0A1B0GVH7	501 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	PLSCR5	A0PG75	271 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	TMEM247	A6NEH6	219 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	HNRNPCL2	B2RXH8	293 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	HNRNPCL3	B7ZW38	293 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	CLDN34	H7C241	214 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393		M0QZ24	198 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	PLPP3	O14495	311 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	TM9SF1	O15321	606 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	HNRNPCL1	O60812	293 aa	Known RBP	6.6	□□□□□ -1.35
NVL-223	ENST00000496393	MFN2	O95140	757 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	OR6A2	O95222	327 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	FARS2	O95363	451 aa	Known RBP	6.6	□□□□□ -1.35
NVL-223	ENST00000496393	SNAP29	O95721	258 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	TSPAN15	O95858	294 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	IGHV3-13	P01766	116 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	IGHV2-70	P01814	119 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	SERPINE1	P05121	402 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	HNRNPCL4	P0DMR1	293 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	ADORA3	P0DMS8	318 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	BGN	P21810	368 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	APLNR	P35414	380 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	WNT5A	P41221	380 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	ETV4	P43268	484 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	MTNR1A	P48039	350 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	RPL14	P50914	215 aa	Known RBP	6.6	□□□□□ -1.35
NVL-223	ENST00000496393	RAG2	P55895	527 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	KRTAP10-3	P60369	221 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	HSF2	Q03933	536 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	SLC3A1	Q07837	685 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	SLC36A2	Q495M3	483 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	FAM209A	Q5JX71	171 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	C6orf10	Q5SRN2	563 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	C16orf87	Q6PH81	154 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	LRFN4	Q6PJG9	635 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	C5orf46	Q6UWT4	87 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	BRD3OS	Q6XYD6	125 aa		6.6	□□□□□ -1.35
NVL-223	ENST00000496393	RFPL4B	Q6ZWI9	263 aa		6.6	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms