RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 NPR2P20594 1047 aa15□□□□□ -0.01
HDAC6-235ENST00000495515 IGFBP5P24593 272 aa15□□□□□ -0.01
HDAC6-235ENST00000495515 CRABP1P29762 137 aa15□□□□□ -0.01
HDAC6-235ENST00000495515 RCN1Q15293 331 aa15□□□□□ -0.01
HDAC6-235ENST00000495515 SLC35F1Q5T1Q4 408 aa15□□□□□ -0.01
HDAC6-235ENST00000495515 LEG1Q6P5S2 330 aa15□□□□□ -0.01
HDAC6-235ENST00000495515 ZNF627Q7L945 461 aa15□□□□□ -0.01
HDAC6-235ENST00000495515 WFDC8Q8IUA0 241 aa15□□□□□ -0.01
HDAC6-235ENST00000495515 OR52E2Q8NGJ4 325 aa15□□□□□ -0.01
HDAC6-235ENST00000495515 NANOS1Q8WY41 292 aaKnown RBP15□□□□□ -0.01
HDAC6-235ENST00000495515 NMD3Q96D46 503 aaKnown RBP15□□□□□ -0.01
HDAC6-235ENST00000495515 ZNF837Q96EG3 531 aaPredicted RBP15□□□□□ -0.01
HDAC6-235ENST00000495515 TMEM38BQ9NVV0 291 aa15□□□□□ -0.01
HDAC6-235ENST00000495515 HCFC1P51610 2035 aa15□□□□□ -0.01
HDAC6-235ENST00000495515 FREM1Q5H8C1 2179 aa15□□□□□ -0.01
HDAC6-235ENST00000495515 A0A096LPE4 126 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 ARPC4-TTLL3A0A0A6YYG9 625 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 A0A1W2PPZ6 126 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 RIIAD1A6NNX1 92 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 H7C1C5 153 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 SLC2A10O95528 541 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 HMGN1P05114 100 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 OR8G3PP0DMU2 310 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 B4GALT1P15291 398 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 CRYGSP22914 178 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 GRK5P34947 590 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 CDKN2AP42771 156 aaKnown RBP14.99□□□□□ -0.01
HDAC6-235ENST00000495515 GIPRP48546 466 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 CRISP1P54107 249 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 LCN6P62502 163 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 ELF3P78545 371 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-235ENST00000495515 PPP2R2BQ00005 443 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 FMODQ06828 376 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.99□□□□□ -0.01
HDAC6-235ENST00000495515 DAG1Q14118 895 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 GINS1Q14691 196 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 DAZAP2Q15038 168 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-235ENST00000495515 PGGHGQ32M88 737 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 HIKESHIQ53FT3 197 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 ALKBH2Q6NS38 261 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 SLC25A47Q6Q0C1 308 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 OR4Q3Q8NH05 313 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 OR52N5Q8NH56 324 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 NSMAFQ92636 917 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 EME1Q96AY2 570 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 NMNAT3Q96T66 252 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 CIB1Q99828 191 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 PRRG3Q9BZD7 231 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 SYT4Q9H2B2 425 aa14.99□□□□□ -0.01
HDAC6-235ENST00000495515 ANKHD1Q8IWZ3 2542 aaKnown RBP14.99□□□□□ -0.01
HDAC6-235ENST00000495515 SLC16A7O60669 478 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 KHDRBS3O75525 346 aaKnown RBP14.98□□□□□ -0.01
HDAC6-235ENST00000495515 THBDP07204 575 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 ANPEPP15144 967 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 ZNF3P17036 446 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 CAPZA2P47755 286 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 RAD23AP54725 363 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 MRPS34P82930 218 aaKnown RBP14.98□□□□□ -0.01
HDAC6-235ENST00000495515 BEX5Q5H9J7 111 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 ZBTB49Q6ZSB9 765 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 PTCHD4Q6ZW05 846 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 DPPA2Q7Z7J5 298 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 SLC22A24Q8N4F4 322 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 CBR4Q8N4T8 237 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 WDR31Q8NA23 367 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 MARVELD3Q96A59 401 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 KCNN2Q9H2S1 579 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 RERGLQ9H628 205 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 DCLRE1BQ9H816 532 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 SIAEQ9HAT2 523 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 USE1Q9NZ43 259 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 SLC25A15Q9Y619 301 aa14.98□□□□□ -0.01
HDAC6-235ENST00000495515 EI24O14681 340 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 RRP9O43818 475 aaKnown RBP14.97□□□□□ -0.01
HDAC6-235ENST00000495515 SEC14L2O76054 403 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 SSTR2P30874 369 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 ALDH3A2P51648 485 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 NR1H2P55055 460 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 CDK5Q00535 292 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 FBXW10Q5XX13 1052 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 C22orf34Q6ZV56 151 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 IQCF1Q8N6M8 205 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 SDR9C7Q8NEX9 313 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 C14orf79Q96F83 325 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 PLEKHA8Q96JA3 519 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 SLC38A2Q96QD8 506 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 NUAK2Q9H093 628 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 NELFAQ9H3P2 528 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 ESRP2Q9H6T0 727 aaKnown RBP14.97□□□□□ -0.01
HDAC6-235ENST00000495515 SEC61A2Q9H9S3 476 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 SLC25A19Q9HC21 320 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 CMC2Q9NRP2 79 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 FKBP7Q9Y680 259 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 ALPK2Q86TB3 2170 aa14.97□□□□□ -0.01
HDAC6-235ENST00000495515 IGKV1D-43A0A0B4J1Z2 117 aa14.96□□□□□ -0.01
HDAC6-235ENST00000495515 A0A1W2PPL8 197 aa14.96□□□□□ -0.01
HDAC6-235ENST00000495515 A0A1W2PR80 420 aa14.96□□□□□ -0.01
HDAC6-235ENST00000495515 A6NNC1 897 aa14.96□□□□□ -0.01
HDAC6-235ENST00000495515 MITFO75030 526 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-235ENST00000495515 UBL3O95164 117 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms