RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 C10orf128Q5T292 105 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 OR2T5Q6IEZ7 315 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 TMEM53Q6P2H8 277 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 PGM2L1Q6PCE3 622 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 SMARCD3Q6STE5 483 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 B3GLCTQ6Y288 498 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 SLC16A14Q7RTX9 510 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 SPATA24Q86W54 205 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 AQP12AQ8IXF9 295 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 LRRC75A-AS1Q8N1F1 130 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 LRRC18Q8N456 261 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 LINC00471Q8N535 108 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 IL17RDQ8NFM7 739 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 OR2T29Q8NH02 315 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 ZNF519Q8TB69 540 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 FANK1Q8TC84 345 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 HTRA1Q92743 480 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 Q96M85 177 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 GPA33Q99795 319 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 DENND2DQ9H6A0 471 aaPredicted RBP13.86□□□□□ -0.19
LIME1-209ENST00000494776 REEP1Q9H902 201 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 SMURF2Q9HAU4 748 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 B3GNT2Q9NY97 397 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 LYVE1Q9Y5Y7 322 aa13.86□□□□□ -0.19
LIME1-209ENST00000494776 ALPK2Q86TB3 2170 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 DHRS12A0PJE2 317 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 H7C1C5 153 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 GSC2O15499 205 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 CCNB2O95067 398 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 PATE4P0C8F1 98 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 ZNF26P17031 533 aaPredicted RBP13.85□□□□□ -0.19
LIME1-209ENST00000494776 FPR3P25089 353 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 TTKP33981 857 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 PTH2RP49190 550 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 HMGA2P52926 109 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 LCN6P62502 163 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 SGCAQ16586 387 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 NRN1LQ496H8 165 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 GPR139Q6DWJ6 353 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 ZNF544Q6NX49 715 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 DPY19L2P2Q6ZN68 376 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 DPPA2Q7Z7J5 298 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 MUC15Q8N387 334 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 CLDN22Q8N7P3 220 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 OR4F15Q8NGB8 312 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 TRMT61AQ96FX7 289 aaKnown RBP13.85□□□□□ -0.19
LIME1-209ENST00000494776 CHID1Q9BWS9 393 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 CADM1Q9BY67 442 aaKnown RBP13.85□□□□□ -0.19
LIME1-209ENST00000494776 SEC61A2Q9H9S3 476 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 FBXL3Q9UKT7 428 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 SAMHD1Q9Y3Z3 626 aaKnown RBP13.85□□□□□ -0.19
LIME1-209ENST00000494776 IER3IP1Q9Y5U9 82 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 U3KQV3 271 aa13.85□□□□□ -0.19
LIME1-209ENST00000494776 RAI1Q7Z5J4 1906 aaPredicted RBP13.85□□□□□ -0.19
LIME1-209ENST00000494776 TEX13CA0A0J9YWL9 993 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 A0A1W2PPL8 197 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 SOCS2O14508 198 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 GNGT2O14610 69 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 MGRN1O60291 552 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 CST1P01037 141 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 NPR2P20594 1047 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 CALCRP30988 508 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 SDHAP31040 664 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 SLC6A6P31641 620 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 APOBEC3AP31941 199 aaPredicted RBP13.84□□□□□ -0.19
LIME1-209ENST00000494776 CDAP32320 146 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 CDKN1AP38936 164 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 ZNF133P52736 654 aaPredicted RBP13.84□□□□□ -0.19
LIME1-209ENST00000494776 ATP5J2P56134 94 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 PPP1R8Q12972 351 aaKnown RBP13.84□□□□□ -0.19
LIME1-209ENST00000494776 TSPAN31Q12999 210 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 KRR1Q13601 381 aaKnown RBP13.84□□□□□ -0.19
LIME1-209ENST00000494776 RAB39AQ14964 217 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 RFX4Q33E94 735 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 MESTQ5EB52 335 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 SHEQ5VZ18 495 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 C1orf94Q6P1W5 598 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 PGBD2Q6P3X8 592 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 SLC25A47Q6Q0C1 308 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 VHLLQ6RSH7 139 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 THSD4Q6ZMP0 1018 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 MYPOPQ86VE0 399 aaPredicted RBP13.84□□□□□ -0.19
LIME1-209ENST00000494776 ADGRG5Q8IZF4 528 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 OR9Q2Q8NGE9 314 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 CANT1Q8WVQ1 401 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 RASD2Q96D21 266 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 MS4A3Q96HJ5 214 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 GPX7Q96SL4 187 aaPredicted RBP13.84□□□□□ -0.19
LIME1-209ENST00000494776 TRAF4Q9BUZ4 470 aaPredicted RBP13.84□□□□□ -0.19
LIME1-209ENST00000494776 GSX2Q9BZM3 304 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 OR52D1Q9H346 318 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 SIAEQ9HAT2 523 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 NOX3Q9HBY0 568 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 CCNB1IP1Q9NPC3 277 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 NRIP3Q9NQ35 241 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 CBLN4Q9NTU7 201 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 ZNF224Q9NZL3 707 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 POMPQ9Y244 141 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 DSCAMO60469 2012 aa13.84□□□□□ -0.19
LIME1-209ENST00000494776 IGKV1D-43A0A0B4J1Z2 117 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms