RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 PNPP00491 289 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 HIST1H2ABP04908 130 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 F13BP05160 661 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 EPHA1P21709 976 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 CCNOP22674 350 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 SELENOVP59797 346 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 TBC1D28Q2M2D7 210 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 SPATA46Q5T0L3 261 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 USP51Q70EK9 711 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 HIST3H2AQ7L7L0 130 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 NANOGNBQ7Z5D8 188 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 RBM15BQ8NDT2 890 aaKnown RBP10.78□□□□□ -0.68
SKA1-205ENST00000494518 ZNF418Q8TF45 676 aaPredicted RBP10.78□□□□□ -0.68
SKA1-205ENST00000494518 HIST1H2ACQ93077 130 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 MCHR2Q969V1 340 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 ZNF385DQ9H6B1 395 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 PCDHB10Q9UN67 800 aa10.78□□□□□ -0.68
SKA1-205ENST00000494518 TRAPPC13A5PLN9 417 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 MCIDASD6RGH6 385 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 PLPP2O43688 288 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 FMO6PO60774 539 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 SHOX2O60902 331 aaPredicted RBP10.77□□□□□ -0.69
SKA1-205ENST00000494518 TGDSO95455 350 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 SLC2A10O95528 541 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 IGHG1P01857 330 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 ZNF250P15622 560 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 TNFRSF1BP20333 461 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 CD247P20963 164 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 DRD4P21917 467 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 CDAP32320 146 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 RBMXP38159 391 aaKnown RBP10.77□□□□□ -0.69
SKA1-205ENST00000494518 MRPS11P82912 194 aaKnown RBP10.77□□□□□ -0.69
SKA1-205ENST00000494518 HSF2Q03933 536 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 ZP4Q12836 540 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 SLC36A2Q495M3 483 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 PEG10Q86TG7 708 aaKnown RBP10.77□□□□□ -0.69
SKA1-205ENST00000494518 RETREG3Q86VR2 466 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 NOXO1Q8NFA2 376 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 OR1J1Q8NGS3 322 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 PFN4Q8NHR9 129 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 ZNF519Q8TB69 540 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 C11orf40Q8WZ69 217 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 GCDHQ92947 438 aaPredicted RBP10.77□□□□□ -0.69
SKA1-205ENST00000494518 TAMM41Q96BW9 452 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 SLC6A7Q99884 636 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 G6PC2Q9NQR9 355 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 DECR2Q9NUI1 292 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 LEF1Q9UJU2 399 aaPredicted RBP10.77□□□□□ -0.69
SKA1-205ENST00000494518 ZNF229Q9UJW7 825 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 WIPI2Q9Y4P8 454 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 GMEB1Q9Y692 573 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 TRRAPQ9Y4A5 3859 aa10.77□□□□□ -0.69
SKA1-205ENST00000494518 IGLV3-9A0A075B6K5 115 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 A0A0A6YYJ9 748 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 IGHV1-69-2A0A0G2JMI3 117 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 IQCMA0A1B0GVH7 501 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 SLC22A23A1A5C7 686 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 WIPF1O43516 503 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 SPRY1O43609 319 aaPredicted RBP10.76□□□□□ -0.69
SKA1-205ENST00000494518 SPRY3O43610 288 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 ASAH2BP0C7U1 165 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 MAKP20794 623 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 APLNRP35414 380 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 RAD52P43351 418 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 ATP4BP51164 291 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 ZNF84P51523 738 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 UGT2B15P54855 530 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 UCP2P55851 309 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 PLP2Q04941 152 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 FMODQ06828 376 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 RPL18Q07020 188 aaKnown RBP10.76□□□□□ -0.69
SKA1-205ENST00000494518 PABPC1L2AQ5JQF8 200 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 TMEM255AQ5JRV8 349 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 ACSM5Q6NUN0 579 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 C3orf56Q8N813 242 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 AKR7LQ8NHP1 331 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 SLC26A7Q8TE54 656 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 ASB10Q8WXI3 467 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 C22orf15Q8WYQ4 148 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 NSMAFQ92636 917 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 CGREF1Q99674 301 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 PRSS27Q9BQR3 290 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 TMPRSS13Q9BYE2 586 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 EVA1AQ9H8M9 152 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 SAP30LQ9HAJ7 183 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 MEPEQ9NQ76 525 aaPredicted RBP10.76□□□□□ -0.69
SKA1-205ENST00000494518 SLCO1C1Q9NYB5 712 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 GPR160Q9UJ42 338 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 TRIM33Q9UPN9 1127 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 MEGF8Q7Z7M0 2845 aa10.76□□□□□ -0.69
SKA1-205ENST00000494518 IGKV1D-43A0A0B4J1Z2 117 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 A0A1W2PRG6 482 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 ISPDA4D126 451 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 CLDN25C9JDP6 229 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 ANGPT2O15123 496 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 ENTPD5O75356 428 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 DEAF1O75398 565 aaPredicted RBP10.75□□□□□ -0.69
SKA1-205ENST00000494518 TRMUO75648 421 aaKnown RBP10.75□□□□□ -0.69
SKA1-205ENST00000494518 SNAP29O95721 258 aa10.75□□□□□ -0.69
SKA1-205ENST00000494518 IGHV2-5P01817 119 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms