RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 MAGEA1P43355 309 aa4.38□□□□□ -1.71
SMC2-205ENST00000493955 RPS5P46782 204 aaKnown RBP4.38□□□□□ -1.71
SMC2-205ENST00000493955 PAX5Q02548 391 aa4.38□□□□□ -1.71
SMC2-205ENST00000493955 ZNF92Q03936 586 aa4.38□□□□□ -1.71
SMC2-205ENST00000493955 SPAG1Q07617 926 aa4.38□□□□□ -1.71
SMC2-205ENST00000493955 ORC2Q13416 577 aaPredicted RBP4.38□□□□□ -1.71
SMC2-205ENST00000493955 KIAA0087Q14695 138 aa4.38□□□□□ -1.71
SMC2-205ENST00000493955 RSBN1Q5VWQ0 802 aaPredicted RBP4.38□□□□□ -1.71
SMC2-205ENST00000493955 CTRB2Q6GPI1 263 aa4.38□□□□□ -1.71
SMC2-205ENST00000493955 PQLC3Q8N755 202 aa4.38□□□□□ -1.71
SMC2-205ENST00000493955 SLC7A13Q8TCU3 470 aa4.38□□□□□ -1.71
SMC2-205ENST00000493955 DNTTIP1Q9H147 329 aa4.38□□□□□ -1.71
SMC2-205ENST00000493955 UGT1A10Q9HAW8 530 aa4.38□□□□□ -1.71
SMC2-205ENST00000493955 MRPS30Q9NP92 439 aaKnown RBP4.38□□□□□ -1.71
SMC2-205ENST00000493955 MRPL22Q9NWU5 206 aaKnown RBP4.38□□□□□ -1.71
SMC2-205ENST00000493955 UXTQ9UBK9 157 aaPredicted RBP4.38□□□□□ -1.71
SMC2-205ENST00000493955 GNPTGQ9UJJ9 305 aa4.38□□□□□ -1.71
SMC2-205ENST00000493955 ZNF256Q9Y2P7 627 aaPredicted RBP4.38□□□□□ -1.71
SMC2-205ENST00000493955 UHRF1BP1Q6BDS2 1440 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 TRAPPC8Q9Y2L5 1435 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 CAMSAP1Q5T5Y3 1602 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 A0A1B0GTQ1 180 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 NDUFAB1O14561 156 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 CLPXO76031 633 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 CLIC3O95833 236 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 ALDOBP05062 364 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 MYL2P10916 166 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 HMOX2P30519 316 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 RBMXP38159 391 aaKnown RBP4.37□□□□□ -1.71
SMC2-205ENST00000493955 CX3CR1P49238 355 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 ILKQ13418 452 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 SOHLH1Q5JUK2 328 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 RALGPS2Q86X27 583 aaPredicted RBP4.37□□□□□ -1.71
SMC2-205ENST00000493955 TMEM61Q8N0U2 210 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 ZADH2Q8N4Q0 377 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 C8orf44Q96CB5 159 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 NRIP2Q9BQI9 281 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 TEKT3Q9BXF9 490 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 OR11A1Q9GZK7 315 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 ELOVL6Q9H5J4 265 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 TMEM165Q9HC07 324 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 CCL28Q9NRJ3 127 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 ING4Q9UNL4 249 aa4.37□□□□□ -1.71
SMC2-205ENST00000493955 POLR1AO95602 1720 aaPredicted RBP4.36□□□□□ -1.71
SMC2-205ENST00000493955 MSH6P52701 1360 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 NCOA1Q15788 1441 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 ZNF518AQ6AHZ1 1483 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 INO80Q9ULG1 1556 aaPredicted RBP4.36□□□□□ -1.71
SMC2-205ENST00000493955 ADGBQ8N7X0 1667 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 IGLV3-10A0A075B6K4 115 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 MRPS12O15235 138 aaKnown RBP4.36□□□□□ -1.71
SMC2-205ENST00000493955 HUS1O60921 280 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 LY6G6DO95868 133 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 CD1BP29016 333 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 MRPL19P49406 292 aaKnown RBP4.36□□□□□ -1.71
SMC2-205ENST00000493955 CAV2P51636 162 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 ACTA2P62736 377 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 ACTG2P63267 376 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 ACTC1P68032 377 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 ACTA1P68133 377 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 ADARB1P78563 741 aaKnown RBP4.36□□□□□ -1.71
SMC2-205ENST00000493955 ECH1Q13011 328 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 MAB21L1Q13394 359 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 HERPUD1Q15011 391 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 HSDL1Q3SXM5 330 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 PAGE3Q5JUK9 113 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 PEX26Q7Z412 305 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 MMAAQ8IVH4 418 aaKnown RBP4.36□□□□□ -1.71
SMC2-205ENST00000493955 MICU2Q8IYU8 434 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 OR1N2Q8NGR9 330 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 SDR42E1Q8WUS8 393 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 TMEM54Q969K7 222 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 SGK3Q96BR1 496 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 PKNOX2Q96KN3 472 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 PRRC1Q96M27 445 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 CCNB1IP1Q9NPC3 277 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 SAMSN1Q9NSI8 373 aaKnown RBP4.36□□□□□ -1.71
SMC2-205ENST00000493955 MMP24Q9Y5R2 645 aa4.36□□□□□ -1.71
SMC2-205ENST00000493955 AGLP35573 1532 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 SYCP2Q9BX26 1530 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 PLXNC1O60486 1568 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 MED1Q15648 1581 aaPredicted RBP4.35□□□□□ -1.71
SMC2-205ENST00000493955 NEURL4Q96JN8 1562 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 ALKQ9UM73 1620 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 STRCP1A6NGW2 1772 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 FAM231BA6NCW3 169 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 ZNF726A6NNF4 738 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 KRTAP4-16G5E9R7 235 aaPredicted RBP4.35□□□□□ -1.71
SMC2-205ENST00000493955 TEX46H3BTG2 121 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 POLR2MP0CAP2 368 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 GKN3PP0CG01 181 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 HPGDP15428 266 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 GSTM3P21266 225 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 HTR1EP28566 365 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 RORCP51449 518 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 HADHQ16836 314 aaKnown RBP4.35□□□□□ -1.71
SMC2-205ENST00000493955 CCDC14Q49A88 953 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 PIP5KL1Q5T9C9 394 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 THOC6Q86W42 341 aaKnown RBP4.35□□□□□ -1.71
SMC2-205ENST00000493955 C20orf203Q8NBC4 194 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms