RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 PEA15Q15121 130 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 RSU1Q15404 277 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 TGIF1Q15583 401 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 BICRALQ6AI39 1079 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 CASP12Q6UXS9 341 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 RNF44Q7L0R7 432 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 S100A7AQ86SG5 101 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 SNIP1Q8TAD8 396 aaKnown RBP10.54□□□□□ -0.72
BRCA1-222ENST00000493919 ADIPOR1Q96A54 375 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 CPNE2Q96FN4 548 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-222ENST00000493919 OTUB1Q96FW1 271 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-222ENST00000493919 MTERF1Q99551 399 aaKnown RBP10.54□□□□□ -0.72
BRCA1-222ENST00000493919 TSNAXQ99598 290 aaKnown RBP10.54□□□□□ -0.72
BRCA1-222ENST00000493919 C1QTNF6Q9BXI9 259 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 FKRPQ9H9S5 495 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 C3orf14Q9HBI5 128 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 STARD5Q9NSY2 213 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 GAR1Q9NY12 217 aaKnown RBP10.54□□□□□ -0.72
BRCA1-222ENST00000493919 YLPM1P49750 1951 aaKnown RBP10.54□□□□□ -0.72
BRCA1-222ENST00000493919 SPTBP11277 2137 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 TCRBV3S1A0A5B6 114 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 FEZF1A0PJY2 475 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 TMEM218A2RU14 115 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 STK16O75716 305 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 STATHP02808 62 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 CD2P06729 351 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 HOXB5P09067 269 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 LIPCP11150 499 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 ANXA3P12429 323 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 MTHFD2P13995 350 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 ZNF44P15621 663 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 HOXA5P20719 270 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 CD82P27701 267 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 CDX1P47902 265 aaPredicted RBP10.53□□□□□ -0.72
BRCA1-222ENST00000493919 GABRA4P48169 554 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 BTG1P62324 171 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 DHODHQ02127 395 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 PLA2G7Q13093 441 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 PWP1Q13610 501 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 GTF2H2Q13888 395 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 SCGB2B2Q4G0G5 96 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 PRAMEF8Q5VWM4 474 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 PRAMEF7Q5VXH5 474 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 MRM1Q6IN84 353 aaKnown RBP10.53□□□□□ -0.72
BRCA1-222ENST00000493919 GTF2H2CQ6P1K8 395 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 FIGNL1Q6PIW4 674 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 ZNF836Q6ZNA1 936 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 SSX6Q7RTT6 188 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 PUSL1Q8N0Z8 303 aaKnown RBP10.53□□□□□ -0.72
BRCA1-222ENST00000493919 IL22RA1Q8N6P7 574 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 PTGR2Q8N8N7 351 aaPredicted RBP10.53□□□□□ -0.72
BRCA1-222ENST00000493919 OR8J1Q8NGP2 316 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 OR6K3Q8NGY3 331 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 THAP6Q8TBB0 222 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 NPRL2Q8WTW4 380 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 ERGIC1Q969X5 290 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 SPSB4Q96A44 273 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 ZNF354BQ96LW1 612 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 MRPL57Q9BQC6 102 aaKnown RBP10.53□□□□□ -0.72
BRCA1-222ENST00000493919 RBCK1Q9BYM8 510 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 CHRNA10Q9GZZ6 450 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 SPRTNQ9H040 489 aaPredicted RBP10.53□□□□□ -0.72
BRCA1-222ENST00000493919 IPPKQ9H8X2 491 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 PGPEP1Q9NXJ5 209 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 KLK4Q9Y5K2 254 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 USP24Q9UPU5 2620 aa10.53□□□□□ -0.72
BRCA1-222ENST00000493919 LOC105369274A0A096LPK9 316 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 LOC102723532A0A0G2JNH3 316 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 EFCAB9A8MZ26 197 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 IMPA2O14732 288 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 KLK10O43240 276 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 ZNF749O43361 778 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 TSPAN19P0C672 248 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 ABCD3P28288 659 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 GRK5P34947 590 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 CCR8P51685 355 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 PPP3R1P63098 170 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 CHRNB3Q05901 458 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 HLXQ14774 488 aaPredicted RBP10.52□□□□□ -0.72
BRCA1-222ENST00000493919 SURF2Q15527 256 aaPredicted RBP10.52□□□□□ -0.72
BRCA1-222ENST00000493919 HIST2H2AA3Q6FI13 130 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 KLHL17Q6TDP4 642 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 LANCL3Q6ZV70 420 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 LRRC70Q7Z2Q7 622 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 ZNF573Q86YE8 665 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 BAP18Q8IXM2 172 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 OR4N4Q8N0Y3 316 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 UBAC2Q8NBM4 344 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 CACNG8Q8WXS5 425 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 RERGQ96A58 199 aaPredicted RBP10.52□□□□□ -0.72
BRCA1-222ENST00000493919 CXorf58Q96LI9 332 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 JAM3Q9BX67 310 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 SNHG12Q9BXW3 62 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 CD244Q9BZW8 370 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 PKIBQ9C010 78 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 TPT1P8Q9HAU6 139 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 PILRAQ9UKJ1 303 aa10.52□□□□□ -0.72
BRCA1-222ENST00000493919 TPST1O60507 370 aa10.52□□□□□ -0.73
BRCA1-222ENST00000493919 KDM4BO94953 1096 aa10.52□□□□□ -0.73
BRCA1-222ENST00000493919 SIX3O95343 332 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms