RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 SCFD1Q8WVM8 642 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 CREB3L1Q96BA8 519 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 SLC41A3Q96GZ6 507 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 NARS2Q96I59 477 aaKnown RBP2.07□□□□□ -2.08
ITGB1-216ENST00000493758 CNN2Q99439 309 aaKnown RBP2.07□□□□□ -2.08
ITGB1-216ENST00000493758 ZSCAN5AQ9BUG6 496 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 TRIM62Q9BVG3 475 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 ANKRD19PQ9H560 264 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 SNX6Q9UNH7 406 aa2.07□□□□□ -2.08
ITGB1-216ENST00000493758 SNTNA6NMZ2 147 aa2.06□□□□□ -2.08
ITGB1-216ENST00000493758 KMOO15229 486 aa2.06□□□□□ -2.08
ITGB1-216ENST00000493758 SPAG6O75602 509 aa2.06□□□□□ -2.08
ITGB1-216ENST00000493758 EIF3GO75821 320 aaKnown RBP eCLIP2.06□□□□□ -2.08
ITGB1-216ENST00000493758 BCHEP06276 602 aa2.06□□□□□ -2.08
ITGB1-216ENST00000493758 HRH1P35367 487 aa2.06□□□□□ -2.08
ITGB1-216ENST00000493758 MAGEA8P43361 318 aa2.06□□□□□ -2.08
ITGB1-216ENST00000493758 RFX3P48380 749 aa2.06□□□□□ -2.08
ITGB1-216ENST00000493758 IRX3P78415 501 aaPredicted RBP2.06□□□□□ -2.08
ITGB1-216ENST00000493758 GINS1Q14691 196 aa2.06□□□□□ -2.08
ITGB1-216ENST00000493758 CFAP157Q5JU67 520 aa2.06□□□□□ -2.08
ITGB1-216ENST00000493758 ZNF684Q5T5D7 378 aa2.06□□□□□ -2.08
ITGB1-216ENST00000493758 RIMKLAQ8IXN7 391 aa2.06□□□□□ -2.08
ITGB1-216ENST00000493758 SEH1LQ96EE3 360 aa2.06□□□□□ -2.08
ITGB1-216ENST00000493758 HSFY1Q96LI6 401 aa2.06□□□□□ -2.08
ITGB1-216ENST00000493758 ZNF681Q96N22 645 aa2.06□□□□□ -2.08
ITGB1-216ENST00000493758 RNF157Q96PX1 679 aa2.06□□□□□ -2.08
ITGB1-216ENST00000493758 SAV1Q9H4B6 383 aaPredicted RBP2.06□□□□□ -2.08
ITGB1-216ENST00000493758 SYNDIG1Q9H7V2 258 aa2.06□□□□□ -2.08
ITGB1-216ENST00000493758 ADAMTS13Q76LX8 1427 aa2.06□□□□□ -2.08
ITGB1-216ENST00000493758 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 A8MUU9 505 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 RAD51BO15315 384 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 SOX15O60248 233 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 UTS2O95399 124 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 HLA-DPB1P04440 258 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 TCN2P20062 427 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 SLC2A5P22732 501 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 EPS15P42566 896 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 CCDC152Q4G0S7 254 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 TEX43Q6ZNM6 134 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 OSR2Q8N2R0 312 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 TM4SF18Q96CE8 201 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 MED8Q96G25 268 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 TTC25Q96NG3 672 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 TSGA13Q96PP4 275 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 P2RX4Q99571 388 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 RARRES2Q99969 163 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 ERP44Q9BS26 406 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 SH3BGRL2Q9UJC5 107 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 PIGLQ9Y2B2 252 aa2.05□□□□□ -2.08
ITGB1-216ENST00000493758 A0A0U1RQV1 116 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 NDC80O14777 642 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 TIMM8AO60220 97 aaPredicted RBP2.04□□□□□ -2.08
ITGB1-216ENST00000493758 CCNKO75909 580 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 RAB3DO95716 219 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 C1GALT1C1LP0DN25 315 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 ATP5C1P36542 298 aaKnown RBP2.04□□□□□ -2.08
ITGB1-216ENST00000493758 CSNK1A1P48729 337 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 IRF4Q15306 451 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 RABL6Q3YEC7 729 aaPredicted RBP2.04□□□□□ -2.08
ITGB1-216ENST00000493758 ASCL5Q7RTU5 278 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 PSTKQ8IV42 348 aaKnown RBP2.04□□□□□ -2.08
ITGB1-216ENST00000493758 OR52M1Q8NGK5 317 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 OR2G2Q8NGZ5 317 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 FAM110BQ8TC76 370 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 C15orf40Q8WUR7 153 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 C17orf50Q8WW18 174 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 PIK3IP1Q96FE7 263 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 PLEKHA8Q96JA3 519 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 PANX2Q96RD6 677 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 RNF5Q99942 180 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 TMEM59Q9BXS4 323 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 POLE4Q9NR33 117 aa2.04□□□□□ -2.08
ITGB1-216ENST00000493758 PTBP2Q9UKA9 531 aaKnown RBP2.04□□□□□ -2.08
ITGB1-216ENST00000493758 HIDE1A8MVS5 230 aa2.03□□□□□ -2.08
ITGB1-216ENST00000493758 BPY2O14599 106 aa2.03□□□□□ -2.08
ITGB1-216ENST00000493758 GABARAPO95166 117 aa2.03□□□□□ -2.08
ITGB1-216ENST00000493758 GUCA1CO95843 209 aa2.03□□□□□ -2.08
ITGB1-216ENST00000493758 GNAO1P09471 354 aa2.03□□□□□ -2.08
ITGB1-216ENST00000493758 NCK1P16333 377 aa2.03□□□□□ -2.08
ITGB1-216ENST00000493758 DESP17661 470 aa2.03□□□□□ -2.08
ITGB1-216ENST00000493758 AQP2P41181 271 aa2.03□□□□□ -2.08
ITGB1-216ENST00000493758 RORCP51449 518 aa2.03□□□□□ -2.08
ITGB1-216ENST00000493758 CEMP1Q6PRD7 247 aaPredicted RBP2.03□□□□□ -2.08
ITGB1-216ENST00000493758 CALHM3Q86XJ0 350 aa2.03□□□□□ -2.08
ITGB1-216ENST00000493758 OR10R2Q8NGX6 335 aa2.03□□□□□ -2.08
ITGB1-216ENST00000493758 RNF139Q8WU17 664 aa2.03□□□□□ -2.08
ITGB1-216ENST00000493758 DOK1Q99704 481 aa2.03□□□□□ -2.08
ITGB1-216ENST00000493758 SLC39A3Q9BRY0 314 aa2.03□□□□□ -2.08
ITGB1-216ENST00000493758 TCHPQ9BT92 498 aa2.03□□□□□ -2.08
ITGB1-216ENST00000493758 RPF2Q9H7B2 306 aaKnown RBP2.03□□□□□ -2.08
ITGB1-216ENST00000493758 ETNK2Q9NVF9 386 aa2.03□□□□□ -2.08
ITGB1-216ENST00000493758 GPATCH2LQ9NWQ4 482 aa2.03□□□□□ -2.08
ITGB1-216ENST00000493758 C15orf38-AP3S2A0A0A6YYH1 394 aa2.02□□□□□ -2.09
ITGB1-216ENST00000493758 CIB4A0PJX0 185 aa2.02□□□□□ -2.09
ITGB1-216ENST00000493758 ZNF233A6NK53 670 aa2.02□□□□□ -2.09
ITGB1-216ENST00000493758 PCP4L1A6NKN8 68 aa2.02□□□□□ -2.09
ITGB1-216ENST00000493758 ZNF850A8MQ14 1090 aa2.02□□□□□ -2.09
ITGB1-216ENST00000493758 GCM2O75603 506 aaPredicted RBP2.02□□□□□ -2.09
ITGB1-216ENST00000493758 YIF1AO95070 293 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms