RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, human

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNB3-208	ENST00000493507	CBLN3	Q6UW01	205 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	TGIF2LY	Q8IUE0	185 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	NUDCD3	Q8IVD9	361 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	FUNDC1	Q8IVP5	155 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	FNDC5	Q8NAU1	212 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	OR5L2	Q8NGL0	311 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	OR13A1	Q8NGR1	328 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	OR4C3	Q8NH37	302 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	NEIL3	Q8TAT5	605 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	PHF10	Q8WUB8	498 aa	Known RBP	4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	RAB8B	Q92930	207 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	PPCDC	Q96CD2	204 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	SAT2	Q96F10	170 aa	Predicted RBP	4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	THOC1	Q96FV9	657 aa	Known RBP	4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	ATP6V1G3	Q96LB4	118 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	DACH2	Q96NX9	599 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	COL21A1	Q96P44	957 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	EPYC	Q99645	322 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	WFDC6	Q9BQY6	131 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	DOHH	Q9BU89	302 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	FAIM2	Q9BWQ8	316 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	CXXC4	Q9H2H0	198 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	GHITM	Q9H3K2	345 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	WDR41	Q9HAD4	459 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	GIN1	Q9NXP7	522 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	AHSP	Q9NZD4	102 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	MED11	Q9P086	117 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	SENP1	Q9P0U3	644 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	SPG11	Q96JI7	2443 aa		4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	CHD3	Q12873	2000 aa	Known RBP	4.27	□□□□□ -1.73
CCNB3-208	ENST00000493507	CR1	P17927	2039 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	MTOR	P42345	2549 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	IGLV3-32	A0A0A0MS00	114 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	TRGV5	A0A0B4J1U4	118 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	IFITM10	A6NMD0	228 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	C15orf62	A8K5M9	175 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	KLRC4-KLRK1	H3BQV0	150 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	BMPR1B	O00238	502 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	ACOX3	O15254	700 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	REM1	O75628	298 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	ZNF432	O94892	652 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	ZWINT	O95229	277 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	H6PD	O95479	791 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	HOXD4	P09016	255 aa	Predicted RBP	4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	IFI6	P09912	130 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	ZNF708	P17019	499 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	NTS	P30990	170 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	GABRA3	P34903	492 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	SLC6A8	P48029	635 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	RFX3	P48380	749 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	HOXA1	P49639	335 aa	Predicted RBP	4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	RPL14	P50914	215 aa	Known RBP	4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	ZNF117	Q03924	483 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	EMX2	Q04743	252 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	STX3	Q13277	289 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	SELPLG	Q14242	412 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	SLC10A1	Q14973	349 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	HEPACAM	Q14CZ8	416 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	GUSBP1	Q15486	140 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	FAM174B	Q3ZCQ3	159 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	ATP6AP1L	Q52LC2	224 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	SAXO2	Q658L1	398 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	ANKFN1	Q8N957	763 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	FAM71C	Q8NEG0	241 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	DMBX1	Q8NFW5	382 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	LILRB4	Q8NHJ6	448 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	PNPT1	Q8TCS8	783 aa	Known RBP	4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	CA5BP1	Q8WTZ4	195 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	ZNF75CP	Q92670	426 aa	Predicted RBP	4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	PHF21A	Q96BD5	680 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	TUBGCP3	Q96CW5	907 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	PPP3R2	Q96LZ3	170 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	MS4A4E	Q96PG1	132 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	OR7D2	Q96RA2	312 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	PAIP2	Q9BPZ3	127 aa	Known RBP	4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	PIGQ	Q9BRB3	760 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	TTYH2	Q9BSA4	534 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	SRXN1	Q9BYN0	137 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	IQCG	Q9H095	443 aa	Known RBP	4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	DSN1	Q9H410	356 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	RAD21L1	Q9H4I0	556 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	COQ10B	Q9H8M1	238 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	ACKR4	Q9NPB9	350 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	MIEF1	Q9NQG6	463 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	DDX18	Q9NVP1	670 aa	Known RBP	4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	SLC25A37	Q9NYZ2	338 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	CNIH4	Q9P003	139 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	ZNF780B	Q9Y6R6	833 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	CAD	P27708	2225 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	ROS1	P08922	2347 aa		4.26	□□□□□ -1.73
CCNB3-208	ENST00000493507	ACAN	P16112	2415 aa		4.25	□□□□□ -1.73
CCNB3-208	ENST00000493507	ABCA2	Q9BZC7	2435 aa		4.25	□□□□□ -1.73
CCNB3-208	ENST00000493507	NF1	P21359	2839 aa		4.25	□□□□□ -1.73
CCNB3-208	ENST00000493507	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.25	□□□□□ -1.73
CCNB3-208	ENST00000493507	RNF103-CHMP3	A0A140T963	221 aa		4.25	□□□□□ -1.73
CCNB3-208	ENST00000493507		A0A1W2PRB8	838 aa		4.25	□□□□□ -1.73
CCNB3-208	ENST00000493507	OR2M5	A3KFT3	312 aa		4.25	□□□□□ -1.73
CCNB3-208	ENST00000493507	SYNDIG1L	A6NDD5	238 aa		4.25	□□□□□ -1.73
CCNB3-208	ENST00000493507		E9PBE3	544 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms