RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 SHARPINQ9H0F6 387 aa11.76□□□□□ -0.53
IRF1-210ENST00000493208 TXNIPQ9H3M7 391 aa11.76□□□□□ -0.53
IRF1-210ENST00000493208 SIAEQ9HAT2 523 aa11.76□□□□□ -0.53
IRF1-210ENST00000493208 SPAG4Q9NPE6 437 aa11.76□□□□□ -0.53
IRF1-210ENST00000493208 MEPEQ9NQ76 525 aaPredicted RBP11.76□□□□□ -0.53
IRF1-210ENST00000493208 ARMCX1Q9P291 453 aa11.76□□□□□ -0.53
IRF1-210ENST00000493208 REV1Q9UBZ9 1251 aa11.76□□□□□ -0.53
IRF1-210ENST00000493208 NSD1Q96L73 2696 aaPredicted RBP11.76□□□□□ -0.53
IRF1-210ENST00000493208 SH3PXD2BA1X283 911 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 EFCAB9A8MZ26 197 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 LYPD3O95274 346 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 SNAP29O95721 258 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 ZNF35P13682 527 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 AQP2P41181 271 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 SLC7A2P52569 658 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 UGT2B15P54855 530 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 SMIM11AP58511 58 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 TEKQ02763 1124 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 HGFACQ04756 655 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 SCGB2A2Q13296 93 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 NKPD1Q17RQ9 610 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 PCGF3Q3KNV8 242 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 C10orf128Q5T292 105 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 NKAIN4Q8IVV8 208 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 SKA3Q8IX90 412 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 POU5F2Q8N7G0 328 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 CPEB3Q8NE35 698 aaKnown RBP11.75□□□□□ -0.53
IRF1-210ENST00000493208 OR4K5Q8NGD3 323 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 PFN4Q8NHR9 129 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 UBASH3BQ8TF42 649 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 ACOT11Q8WXI4 607 aaPredicted RBP11.75□□□□□ -0.53
IRF1-210ENST00000493208 HTRA1Q92743 480 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 HPS1Q92902 700 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 DOK1Q99704 481 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 GRHPRQ9UBQ7 328 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 HIF3AQ9Y2N7 669 aa11.75□□□□□ -0.53
IRF1-210ENST00000493208 NAV3Q8IVL0 2385 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 AHCYL1O43865 530 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 THY1P04216 161 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 LCKP06239 509 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 ADRA2AP08913 450 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 RPL4P36578 427 aaKnown RBP11.74□□□□□ -0.53
IRF1-210ENST00000493208 MNAT1P51948 309 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 KLF3P57682 345 aaPredicted RBP11.74□□□□□ -0.53
IRF1-210ENST00000493208 RPL27P61353 136 aaKnown RBP11.74□□□□□ -0.53
IRF1-210ENST00000493208 MRPS34P82930 218 aaKnown RBP11.74□□□□□ -0.53
IRF1-210ENST00000493208 RAB39AQ14964 217 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 HIST3H3Q16695 136 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 ZMAT1Q5H9K5 638 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 CGB2Q6NT52 195 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 TMEM154Q6P9G4 183 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 NHLRC1Q6VVB1 395 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 CBLL1Q75N03 491 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 SLC15A3Q8IY34 581 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 ZNF786Q8N393 782 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 SYT14Q8NB59 555 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 MCUR1Q96AQ8 359 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 ZNF416Q9BWM5 594 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 ZNF446Q9NWS9 450 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 DUSP13Q9UII6 198 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 HEATR1Q9H583 2144 aaKnown RBP11.74□□□□□ -0.53
IRF1-210ENST00000493208 PRR14LQ5THK1 2151 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 PLCE1Q9P212 2302 aa11.74□□□□□ -0.53
IRF1-210ENST00000493208 LMX1BO60663 402 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 SHOX2O60902 331 aaPredicted RBP11.73□□□□□ -0.53
IRF1-210ENST00000493208 TRMUO75648 421 aaKnown RBP11.73□□□□□ -0.53
IRF1-210ENST00000493208 SERPINA1P01009 418 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 FAM157CP0CG43 387 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 ZNF23P17027 643 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 TNFRSF1BP20333 461 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 GIFP27352 417 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 GCH1P30793 250 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 LIPAP38571 399 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 ARHGDIAP52565 204 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 CRYBA2P53672 197 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 MRPS11P82912 194 aaKnown RBP11.73□□□□□ -0.53
IRF1-210ENST00000493208 PRKCDQ05655 676 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 TOP3AQ13472 1001 aaPredicted RBP11.73□□□□□ -0.53
IRF1-210ENST00000493208 LRFN4Q6PJG9 635 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 MBOAT2Q6ZWT7 520 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 NRMQ8IXM6 262 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 TEX29Q8N6K0 151 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 ANKS4BQ8N8V4 417 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 ZNF519Q8TB69 540 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 SYNPRQ8TBG9 265 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 MS4A3Q96HJ5 214 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 ZNF347Q96SE7 839 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 SEPHS2Q99611 448 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 SH3GL3Q99963 347 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 ELAC2Q9BQ52 826 aaKnown RBP11.73□□□□□ -0.53
IRF1-210ENST00000493208 MRPL13Q9BYD1 178 aaKnown RBP11.73□□□□□ -0.53
IRF1-210ENST00000493208 CYSLTR2Q9NS75 346 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 CMTM6Q9NX76 183 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 ADA2Q9NZK5 511 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 CGGBP1Q9UFW8 167 aaPredicted RBP11.73□□□□□ -0.53
IRF1-210ENST00000493208 A4GNTQ9UNA3 340 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 AURKCQ9UQB9 309 aa11.73□□□□□ -0.53
IRF1-210ENST00000493208 LOC100289279A0A1B0GTE1 492 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 PLSCR5A0PG75 271 aa11.72□□□□□ -0.53
IRF1-210ENST00000493208 C12orf71A8MTZ7 269 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms