RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 ALG12Q9BV10 488 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 FN3KQ9H479 309 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 B3GAT2Q9NPZ5 323 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 GALNT8Q9NY28 637 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 UPB1Q9UBR1 384 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 PROCRQ9UNN8 238 aa11.85□□□□□ -0.51
MSH6-208ENST00000493177 FAM183AA6NL82 134 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 CASKO14936 926 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 MPZL2O60487 215 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 ZNF432O94892 652 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 IGHV3-9P01782 118 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 GNAO1P09471 354 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 PGA4P0DJD7 388 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 PGA3P0DJD8 388 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 NR2C1P13056 603 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 NTF4P34130 210 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 KIR2DL2P43627 348 aaPredicted RBP11.84□□□□□ -0.51
MSH6-208ENST00000493177 CENPAP49450 140 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 SORDQ00796 357 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 PLBD1Q6P4A8 553 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 VWA1Q6PCB0 445 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 CXXC5Q7LFL8 322 aaKnown RBP11.84□□□□□ -0.51
MSH6-208ENST00000493177 CPOQ8IVL8 374 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 C20orf196Q8IYI0 205 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 ENTHD1Q8IYW4 607 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 TMEM123Q8N131 208 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 NPEPL1Q8NDH3 523 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 OR8J1Q8NGP2 316 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 OR9Q1Q8NGQ5 310 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 TRUB1Q8WWH5 349 aaKnown RBP11.84□□□□□ -0.51
MSH6-208ENST00000493177 UBE2FQ969M7 185 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 KCNK17Q96T54 332 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 ULBP2Q9BZM5 246 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 SYT4Q9H2B2 425 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 OR51V1Q9H2C8 321 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 CLEC4MQ9H2X3 399 aaPredicted RBP11.84□□□□□ -0.51
MSH6-208ENST00000493177 SLCO5A1Q9H2Y9 848 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 MED20Q9H944 212 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 SRA1Q9HD15 236 aaKnown RBP11.84□□□□□ -0.51
MSH6-208ENST00000493177 HINT3Q9NQE9 182 aaKnown RBP11.84□□□□□ -0.51
MSH6-208ENST00000493177 RPRD1BQ9NQG5 326 aaKnown RBP11.84□□□□□ -0.51
MSH6-208ENST00000493177 ASB6Q9NWX5 421 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 ZNF226Q9NYT6 803 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 GLTPQ9NZD2 209 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 H2AFY2Q9P0M6 372 aaPredicted RBP11.84□□□□□ -0.51
MSH6-208ENST00000493177 AASSQ9UDR5 926 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 NDRG3Q9UGV2 375 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 EDARQ9UNE0 448 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 UNC79Q9P2D8 2635 aa11.84□□□□□ -0.51
MSH6-208ENST00000493177 SLC22A23A1A5C7 686 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 OR6C68A6NDL8 312 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 OR6C65A6NJZ3 312 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 CENPBD1B2RD01 187 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 MSTNO14793 375 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 AHCYL1O43865 530 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 SLC16A7O60669 478 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 UPK3AO75631 287 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 QDPRP09417 244 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 RPS7P62081 194 aaKnown RBP11.83□□□□□ -0.52
MSH6-208ENST00000493177 FMODQ06828 376 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 LGALS3BPQ08380 585 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 GUSBP1Q15486 140 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 KLHL12Q53G59 568 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 TSPO2Q5TGU0 170 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 KRT80Q6KB66 452 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 DNM1P34Q6PK57 102 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 USP51Q70EK9 711 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 THAP5Q7Z6K1 395 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 PROKR2Q8NFJ6 384 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 FNDC8Q8TC99 324 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 NSMAFQ92636 917 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 TMEM54Q969K7 222 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 LRR1Q96L50 414 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 ALKBH3Q96Q83 286 aaPredicted RBP11.83□□□□□ -0.52
MSH6-208ENST00000493177 SNX18Q96RF0 628 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 MRPL13Q9BYD1 178 aaKnown RBP11.83□□□□□ -0.52
MSH6-208ENST00000493177 ANKRD60Q9BZ19 345 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 OPN3Q9H1Y3 402 aaPredicted RBP11.83□□□□□ -0.52
MSH6-208ENST00000493177 CLN6Q9NWW5 311 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 DNAJC27Q9NZQ0 273 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 VSX1Q9NZR4 365 aaPredicted RBP11.83□□□□□ -0.52
MSH6-208ENST00000493177 JKAMPQ9P055 326 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 PRSS50Q9UI38 385 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 HSPE1-MOB4S4R3N1 261 aa11.83□□□□□ -0.52
MSH6-208ENST00000493177 CRYBG3Q68DQ2 2970 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 A6NNC1 897 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 FAM171A2A8MVW0 826 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 A8MXE2 369 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 KHDRBS3O75525 346 aaKnown RBP11.82□□□□□ -0.52
MSH6-208ENST00000493177 TNFSF13O75888 250 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 GYPBP06028 91 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 EPXP11678 715 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 MYF6P23409 242 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 EDNRAP25101 427 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 CRABP1P29762 137 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 PYCR1P32322 319 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 OR3A2P47893 321 aa11.82□□□□□ -0.52
MSH6-208ENST00000493177 SNRPGP62308 76 aaKnown RBP11.82□□□□□ -0.52
MSH6-208ENST00000493177 MAD2L1BPQ15013 274 aaPredicted RBP11.82□□□□□ -0.52
MSH6-208ENST00000493177 PHYHD1Q5SRE7 291 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms