RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 TRILQ7L0X0 811 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 PELI1Q96FA3 418 aa12.41□□□□□ -0.42
SMPD4-219ENST00000491128 K7EM74 188 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 DOK2O60496 412 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 CLEC2LP0C7M8 214 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 OR2T7P0C7T2 308 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 CD46P15529 392 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 ZNF17P17021 662 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 TNFSF10P50591 281 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 CAV3P56539 151 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 ADAM8P78325 824 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 GGTLC2Q14390 218 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 SLC35D3Q5M8T2 416 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 FAM27D1Q5T7N8 215 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 C19orf48Q6RUI8 117 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 ADCK1Q86TW2 530 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 OR2T27Q8NH04 317 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 OR6S1Q8NH40 331 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 OR52N1Q8NH53 320 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 ABHD3Q8WU67 409 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 HAS2Q92819 552 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 FAM117AQ9C073 453 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 SEC61A2Q9H9S3 476 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 VSX1Q9NZR4 365 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-219ENST00000491128 IKZF2Q9UKS7 526 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 SF3B6Q9Y3B4 125 aaKnown RBP12.4□□□□□ -0.42
SMPD4-219ENST00000491128 TRIM64BA6NI03 449 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 ZNF891A8MT65 544 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-219ENST00000491128 PMS2P2O95744 297 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 IGHMP01871 453 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 SELENOPP49908 381 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 CLRN1P58418 232 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 PHYHD1Q5SRE7 291 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 VASH1Q7L8A9 365 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-219ENST00000491128 POMGNT2Q8NAT1 580 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 ORAI1Q96D31 301 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 OXGR1Q96P68 337 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 INTS14Q96SY0 518 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 PDCD1LG2Q9BQ51 273 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 MFRPQ9BY79 579 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 LAMP5Q9UJQ1 280 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 TRAPPC4Q9Y296 219 aa12.4□□□□□ -0.42
SMPD4-219ENST00000491128 SVILO95425 2214 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 A0A1W2PNV4 684 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 SLC22A1O15245 554 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 AKAP8O43823 692 aaKnown RBP12.39□□□□□ -0.43
SMPD4-219ENST00000491128 MT-ND5P03915 603 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 POU4F2Q12837 409 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 LRRN1Q6UXK5 716 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 DYNC2LI1Q8TCX1 351 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 TXNL4BQ9NX01 149 aaKnown RBP12.39□□□□□ -0.43
SMPD4-219ENST00000491128 CLEC4AQ9UMR7 237 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 KLF13Q9Y2Y9 288 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-219ENST00000491128 NOX1Q9Y5S8 564 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 PHF3Q92576 2039 aaKnown RBP12.39□□□□□ -0.43
SMPD4-219ENST00000491128 A0A1W2PPL8 197 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 NPIPA2E9PIF3 369 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 NPIPA3F8WFD2 350 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 KLRC4-KLRK1H3BQV0 150 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 IGHV3-9P01782 118 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 TPBGQ13641 420 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 SLC16A9Q7RTY1 509 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 ALDH16A1Q8IZ83 802 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 PPP1R14AQ96A00 147 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 ZNF837Q96EG3 531 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-219ENST00000491128 OR2B2Q9GZK3 357 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 PPIL3Q9H2H8 161 aaKnown RBP12.39□□□□□ -0.43
SMPD4-219ENST00000491128 EXO5Q9H790 373 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 EMC7Q9NPA0 242 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 B4GALT7Q9UBV7 327 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 STUB1Q9UNE7 303 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 MOKQ9UQ07 419 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 FKBP7Q9Y680 259 aa12.39□□□□□ -0.43
SMPD4-219ENST00000491128 ZNF726A6NNF4 738 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 PDGFAP04085 211 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 PGA4P0DJD7 388 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 PGA3P0DJD8 388 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 RPS19P39019 145 aaKnown RBP12.38□□□□□ -0.43
SMPD4-219ENST00000491128 SOX8P57073 446 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 NANOS3P60323 173 aaKnown RBP12.38□□□□□ -0.43
SMPD4-219ENST00000491128 CREB3L2Q70SY1 520 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 CDC20BQ86Y33 519 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 MRPL13Q9BYD1 178 aaKnown RBP12.38□□□□□ -0.43
SMPD4-219ENST00000491128 LDAHQ9H6V9 325 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 SNTG1Q9NSN8 517 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 SLCO1C1Q9NYB5 712 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 MRM2Q9UI43 246 aaKnown RBP12.38□□□□□ -0.43
SMPD4-219ENST00000491128 RTTNQ86VV8 2226 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 SHISA3A0PJX4 238 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 QDPRP09417 244 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 EDNRAP25101 427 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 LHX2P50458 406 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 ACTC1P68032 377 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 ACTA1P68133 377 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 CSNK2A1P68400 391 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-219ENST00000491128 TMED1Q13445 227 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 SLC17A1Q14916 467 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 LRFN4Q6PJG9 635 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 YIPF7Q8N8F6 280 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 ZIC4Q8N9L1 334 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms