RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 RAB39AQ14964 217 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 CARTPTQ16568 116 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 C10orf128Q5T292 105 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 FAM205BPQ63HN1 556 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 C8orf82Q6P1X6 216 aaPredicted RBP11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 SLC16A14Q7RTX9 510 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 VTCN1Q7Z7D3 282 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 CYP4Z1Q86W10 505 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 TREML1Q86YW5 311 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 SYT14Q8NB59 555 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 OR4K5Q8NGD3 323 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 FNDC8Q8TC99 324 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 FAM162AQ96A26 154 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 MRPL24Q96A35 216 aaKnown RBP11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 DOK1Q99704 481 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 KCTD14Q9BQ13 255 aaPredicted RBP11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 KCNN2Q9H2S1 579 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 TXNIPQ9H3M7 391 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 RNF121Q9H920 327 aa11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.92□□□□□ -0.5
SPTLC1-207ENST00000488921 ABCA2Q9BZC7 2435 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 VWC2LB2RUY7 222 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 M0R233 179 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 SYNGR3O43761 229 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 GPRIN2O60269 458 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 PIP5K1CO60331 668 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 SERPINA1P01009 418 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 IGHMP01871 453 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 CALB2P22676 271 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 NR4A2P43354 598 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 SLC9A3P48764 834 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 GZMKP49863 264 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 LSM11P83369 360 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 MYBPC1Q00872 1141 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 PLP2Q04941 152 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 CD47Q08722 323 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 GGTLC2Q14390 218 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 ARMC4Q5T2S8 1044 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 CYB5R2Q6BCY4 276 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 FKBP9P1Q75LS8 142 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 CDK20Q8IZL9 346 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 RNF113BQ8IZP6 322 aaKnown RBP11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 SLC30A7Q8NEW0 376 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 OR1J2Q8NGS2 313 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 MOSPD2Q8NHP6 518 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 ACOT11Q8WXI4 607 aaPredicted RBP11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 HSH2DQ96JZ2 352 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 SH3GL3Q99963 347 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 ALG12Q9BV10 488 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 NDEL1Q9GZM8 345 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 LRMDAQ9H2I8 198 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 MS4A5Q9H3V2 200 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 ANKRD19PQ9H560 264 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 SPAG4Q9NPE6 437 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 ABCD2Q9UBJ2 740 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 RPS6KA6Q9UK32 745 aa11.91□□□□□ -0.5
SPTLC1-207ENST00000488921 IQCMA0A1B0GVH7 501 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 TMEM129A0AVI4 362 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 GMNNO75496 209 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 ATP5HO75947 161 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 SNAP29O95721 258 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 ADRA2AP08913 450 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 PATE4P0C8F1 98 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 DAOP14920 347 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 YAP1P46937 504 aaKnown RBP11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 RPL27P61353 136 aaKnown RBP11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 MRPS34P82930 218 aaKnown RBP11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 PRKCDQ05655 676 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 RUNX1T1Q06455 604 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 TOP3AQ13472 1001 aaPredicted RBP11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 FXNQ16595 210 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 TBC1D28Q2M2D7 210 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 ZNF730Q6ZMV8 503 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 RRM2BQ7LG56 351 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 OAFQ86UD1 273 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 PRIMA1Q86XR5 153 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 HIPK1Q86Z02 1210 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 ZNF584Q8IVC4 421 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 NRMQ8IXM6 262 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 RBM15BQ8NDT2 890 aaKnown RBP11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 KCNK17Q96T54 332 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 MRPL37Q9BZE1 423 aaKnown RBP11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 CDH20Q9HBT6 801 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 MAN2C1Q9NTJ4 1040 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 ARL8BQ9NVJ2 186 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 NDE1Q9NXR1 346 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 GMPR2Q9P2T1 348 aaKnown RBP11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 RHCGQ9UBD6 479 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 ZNF346Q9UL40 294 aaKnown RBP11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 TMEM5Q9Y2B1 443 aa11.9□□□□□ -0.5
SPTLC1-207ENST00000488921 SH3PXD2BA1X283 911 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 A6NIZ1 184 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 EFCAB9A8MZ26 197 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 J3KTA2 159 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 SLC2A10O95528 541 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 APEHP13798 732 aaKnown RBP11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 ZNF16P17020 682 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 APLNRP35414 380 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 GUCA1AP43080 201 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 RASSF2P50749 326 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms