RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 KIF16BQ96L93 1317 aa2.09□□□□□ -2.08
PTPN4-212ENST00000488896 MBLAC1A4D2B0 266 aaPredicted RBP2.08□□□□□ -2.08
PTPN4-212ENST00000488896 RP2O75695 350 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 HEXBP07686 556 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 C1GALT1C1LP0DN25 315 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 NCK1P16333 377 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 ATP5C1P36542 298 aaKnown RBP2.08□□□□□ -2.08
PTPN4-212ENST00000488896 CEACAM6P40199 344 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 RFX3P48380 749 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 DUSP3P51452 185 aaPredicted RBP2.08□□□□□ -2.08
PTPN4-212ENST00000488896 ELP6Q0PNE2 266 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 IGFBP7Q16270 282 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 NADK2Q4G0N4 442 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 SFT2D3Q587I9 215 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 OAFQ86UD1 273 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 MIR7-3HGQ8N6C7 128 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 OR2T34Q8NGX1 318 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 COQ8AQ8NI60 647 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 CREB3L1Q96BA8 519 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 FAM3DQ96BQ1 224 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 CDX2Q99626 313 aaPredicted RBP2.08□□□□□ -2.08
PTPN4-212ENST00000488896 ZNF717Q9BY31 904 aaPredicted RBP2.08□□□□□ -2.08
PTPN4-212ENST00000488896 RAB33BQ9H082 229 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 FBXO6Q9NRD1 293 aaPredicted RBP2.08□□□□□ -2.08
PTPN4-212ENST00000488896 SMOXQ9NWM0 555 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 CTSFQ9UBX1 484 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 PNPLA6Q8IY17 1366 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 PTPRTO14522 1441 aa2.08□□□□□ -2.08
PTPN4-212ENST00000488896 A0A0B4J2A0 478 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 BICDL2A1A5D9 508 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 LGALS9O00182 355 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 TBX19O60806 448 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 PEX11AO75192 247 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 SCGNO76038 276 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 UTS2O95399 124 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 IGHV2-5P01817 119 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 KRT8P05787 483 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 IQCF3P0C7M6 154 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 CALM1P0DP23 149 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 CALM2P0DP24 149 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 CALM3P0DP25 149 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 HSPA5P11021 654 aaKnown RBP2.07□□□□□ -2.08
PTPN4-212ENST00000488896 FDFT1P37268 417 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 KIR3DL2P43630 455 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 TCP10Q12799 353 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 TAF9Q16594 264 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 PDZK1Q5T2W1 519 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 GALNT17Q6IS24 598 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 CALHM1Q8IU99 346 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 VSTM4Q8IW00 320 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 PRSS58Q8IYP2 241 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 RTN4IP1Q8WWV3 396 aaPredicted RBP2.07□□□□□ -2.08
PTPN4-212ENST00000488896 TMEM54Q969K7 222 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 SH3GL3Q99963 347 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 PPA2Q9H2U2 334 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 SHPKQ9UHJ6 478 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 AP1M2Q9Y6Q5 423 aa2.07□□□□□ -2.08
PTPN4-212ENST00000488896 IGKV2-24A0A0C4DH68 120 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 OR7A10O76100 309 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 RHOBTB1O94844 696 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 ERLIN2O94905 339 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 APCSP02743 223 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 UBTFL6P0CB48 400 aaPredicted RBP2.06□□□□□ -2.08
PTPN4-212ENST00000488896 COL8A2P25067 703 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 HRH1P35367 487 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 SERPINB5P36952 375 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 ATP1B3P54709 279 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 UGT2B15P54855 530 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 OGDHQ02218 1023 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 ZNF92Q03936 586 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 ZNF616Q08AN1 781 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 IFT88Q13099 833 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 DGUOKQ16854 277 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 ZFP1Q6P2D0 407 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 ENPP6Q6UWR7 440 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 PEX26Q7Z412 305 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 HDDC2Q7Z4H3 204 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 OR8U1Q8NH10 309 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 TBC1D31Q96DN5 1066 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 TEKT3Q9BXF9 490 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 UBE2ZQ9H832 354 aaPredicted RBP2.06□□□□□ -2.08
PTPN4-212ENST00000488896 UVRAGQ9P2Y5 699 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 SIGLEC9Q9Y336 463 aa2.06□□□□□ -2.08
PTPN4-212ENST00000488896 UBXN8O00124 270 aa2.05□□□□□ -2.08
PTPN4-212ENST00000488896 FCMRO60667 390 aa2.05□□□□□ -2.08
PTPN4-212ENST00000488896 IGHDP01880 384 aa2.05□□□□□ -2.08
PTPN4-212ENST00000488896 FGF1P05230 155 aa2.05□□□□□ -2.08
PTPN4-212ENST00000488896 MAS1LP35410 378 aa2.05□□□□□ -2.08
PTPN4-212ENST00000488896 NUTF2P61970 127 aaKnown RBP2.05□□□□□ -2.08
PTPN4-212ENST00000488896 SLC25A24Q6NUK1 477 aa2.05□□□□□ -2.08
PTPN4-212ENST00000488896 LHFPL3Q86UP9 236 aa2.05□□□□□ -2.08
PTPN4-212ENST00000488896 NOXO1Q8NFA2 376 aa2.05□□□□□ -2.08
PTPN4-212ENST00000488896 LINC01560Q8TB33 94 aa2.05□□□□□ -2.08
PTPN4-212ENST00000488896 C15orf40Q8WUR7 153 aa2.05□□□□□ -2.08
PTPN4-212ENST00000488896 THRSPQ92748 146 aa2.05□□□□□ -2.08
PTPN4-212ENST00000488896 SYAP1Q96A49 352 aaPredicted RBP2.05□□□□□ -2.08
PTPN4-212ENST00000488896 ZNF681Q96N22 645 aa2.05□□□□□ -2.08
PTPN4-212ENST00000488896 P2RX4Q99571 388 aa2.05□□□□□ -2.08
PTPN4-212ENST00000488896 RIBC2Q9H4K1 309 aa2.05□□□□□ -2.08
PTPN4-212ENST00000488896 ZNF230Q9UIE0 474 aaPredicted RBP2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms