RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 WFIKKN2Q8TEU8 576 aa14.74□□□□□ -0.05
MCF2L-229ENST00000488765 SPACA1Q9HBV2 294 aa14.74□□□□□ -0.05
MCF2L-229ENST00000488765 SLC2A4RGQ9NR83 387 aa14.74□□□□□ -0.05
MCF2L-229ENST00000488765 MMP26Q9NRE1 261 aa14.74□□□□□ -0.05
MCF2L-229ENST00000488765 DBX1A6NMT0 343 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 ADH1CP00326 375 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 TPT1P13693 172 aaKnown RBP14.73□□□□□ -0.05
MCF2L-229ENST00000488765 SERPINA4P29622 427 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 SLC22A6Q4U2R8 563 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 PLEKHS1Q5SXH7 462 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 C10orf91Q5T1B1 145 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 SPNS3Q6ZMD2 512 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 TPRG1Q6ZUI0 275 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 HSD11B1LQ7Z5J1 315 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 DND1Q8IYX4 353 aaKnown RBP14.73□□□□□ -0.05
MCF2L-229ENST00000488765 OR4K17Q8NGC6 315 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 OR56A3Q8NH54 315 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 RNASE11Q8TAA1 199 aaKnown RBP14.73□□□□□ -0.05
MCF2L-229ENST00000488765 TSSK2Q96PF2 358 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 ALX4Q9H161 411 aaPredicted RBP14.73□□□□□ -0.05
MCF2L-229ENST00000488765 RGCCQ9H4X1 137 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 NEUROD4Q9HD90 331 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 TAC3Q9UHF0 121 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 CCL26Q9Y258 94 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 BHLHE40O14503 412 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 ZIC2O95409 532 aaPredicted RBP14.73□□□□□ -0.05
MCF2L-229ENST00000488765 PAPLNO95428 1278 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 TBX6O95947 436 aaPredicted RBP14.73□□□□□ -0.05
MCF2L-229ENST00000488765 MPC1LP0DKB6 136 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 OR8G3PP0DMU2 310 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 CD70P32970 193 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 MC3RP41968 323 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 TAS2R43P59537 309 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 PPP1R1AQ13522 171 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 ATPAF1Q5TC12 328 aaPredicted RBP14.73□□□□□ -0.05
MCF2L-229ENST00000488765 KHDRBS2Q5VWX1 349 aaKnown RBP14.73□□□□□ -0.05
MCF2L-229ENST00000488765 SLC8B1Q6J4K2 584 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 NXPE4Q6UWF7 544 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 OVCH1Q7RTY7 1134 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 LANCL2Q9NS86 450 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 GAR1Q9NY12 217 aaKnown RBP14.73□□□□□ -0.05
MCF2L-229ENST00000488765 REV3LO60673 3130 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 SOX1O00570 391 aaPredicted RBP14.73□□□□□ -0.05
MCF2L-229ENST00000488765 CD74P04233 296 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 OR13C7P0DN81 318 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 FABP4P15090 132 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 GLP1RP43220 463 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 SPINT3P49223 89 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 ZNF84P51523 738 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 PCBP4P57723 403 aaKnown RBP14.73□□□□□ -0.05
MCF2L-229ENST00000488765 HIST2H3AQ71DI3 136 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 TRAPPC5Q8IUR0 188 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 SUN3Q8TAQ9 357 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 SUSD6Q92537 303 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 FGF13Q92913 245 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 KIRREL1Q96J84 757 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 EIF5A2Q9GZV4 153 aaKnown RBP14.73□□□□□ -0.05
MCF2L-229ENST00000488765 TMED7Q9Y3B3 224 aa14.73□□□□□ -0.05
MCF2L-229ENST00000488765 ATXN7O15265 892 aaPredicted RBP14.72□□□□□ -0.05
MCF2L-229ENST00000488765 HOXA2O43364 376 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 CYTIPO60759 359 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 CD79AP11912 226 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 LSM6P62312 80 aaKnown RBP14.72□□□□□ -0.05
MCF2L-229ENST00000488765 IL13RA1P78552 427 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 SQSTM1Q13501 440 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 ZNF511Q8NB15 262 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 MIB2Q96AX9 1013 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 SLC6A7Q99884 636 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 SPOCK3Q9BQ16 436 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 GSKIPQ9P0R6 139 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 ZNF726A6NNF4 738 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 METTL12A8MUP2 240 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 PRR32B1ATL7 298 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 FAM157CP0CG43 387 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 PI3P19957 117 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 PRSS3P35030 304 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 LSSP48449 732 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 SPCS3P61009 180 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 AP1S1P61966 158 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 NTHL1P78549 312 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 OR4C11Q6IEV9 310 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 GAREM2Q75VX8 874 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 GABRG1Q8N1C3 465 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 OCSTAMPQ9BR26 566 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 CST11Q9H112 138 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 CWH43Q9H720 699 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 RNF122Q9H9V4 155 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 KLHL28Q9NXS3 571 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 DOK5Q9P104 306 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 CACFD1Q9UGQ2 172 aa14.72□□□□□ -0.05
MCF2L-229ENST00000488765 PUS1Q9Y606 427 aaKnown RBP eCLIP14.72□□□□□ -0.05
MCF2L-229ENST00000488765 TRAPPC13A5PLN9 417 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 LRG1P02750 347 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 HEXBP07686 556 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 AK4P27144 223 aaPredicted RBP14.71□□□□□ -0.05
MCF2L-229ENST00000488765 RAB5CP51148 216 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 ZNF343Q6P1L6 599 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 SLC16A11Q8NCK7 471 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 ZPLD1Q8TCW7 415 aa14.71□□□□□ -0.05
MCF2L-229ENST00000488765 FOXRED1Q96CU9 486 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms