RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 FXYD6P3P58550 94 aa13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 TOP3AQ13472 1001 aaPredicted RBP13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 FGD3Q5JSP0 725 aa13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 CYP2R1Q6VVX0 501 aa13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 RRM2BQ7LG56 351 aa13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 FAM122BQ7Z309 247 aa13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 ZNF584Q8IVC4 421 aa13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 ARIH2OSQ8N7S6 290 aa13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 BCAS4Q8TDM0 211 aa13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 C18orf12Q96KH6 178 aa13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 KCNS3Q9BQ31 491 aa13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 ALG12Q9BV10 488 aa13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 C1orf21Q9H246 121 aa13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 SMURF2Q9HAU4 748 aa13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 FLNAP21333 2647 aaKnown RBP13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 H7C1Q1 480 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 UBL3O95164 117 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 FABP3P05413 133 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 CD14P08571 375 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 ACVR1BP36896 505 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 SERPINF1P36955 418 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 ERVK-25P63136 954 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 MRPS34P82930 218 aaKnown RBP13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 FMODQ06828 376 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 TRIM25Q14258 630 aaKnown RBP13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 ADIPOQQ15848 244 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 THSD4Q6ZMP0 1018 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 TRPM8Q7Z2W7 1104 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 ZER1Q7Z7L7 766 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 NANOS1Q8WY41 292 aaKnown RBP13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 NABP1Q96AH0 204 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 MCUR1Q96AQ8 359 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 COX4I2Q96KJ9 171 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 SMR3AQ99954 134 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 BDH2Q9BUT1 245 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 ADAM18Q9Y3Q7 739 aa13.8□□□□□ -0.2
CTDSP1-209ENST00000488627 A6NIZ1 184 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 H7C417 338 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 MGRN1O60291 552 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 ENTPD5O75356 428 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 PDE5AO76074 875 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 GADD45GO95257 159 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 SERPINA5P05154 406 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 MMP7P09237 267 aaPredicted RBP13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 INHBBP09529 407 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 OR4A8P0C604 315 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 NR4A1P22736 598 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 CDAP32320 146 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 THBS4P35443 961 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 MAGEA2P43356 314 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 ZNF84P51523 738 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 HMGA2P52926 109 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 SMIM11AP58511 58 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 RAP1BP61224 184 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 RAP1AP62834 184 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 SPIBQ01892 262 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 TNK1Q13470 666 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 RAB39AQ14964 217 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 ETFDHQ16134 617 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 THEM4Q5T1C6 240 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 FAM205BPQ63HN1 556 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 LCN8Q6JVE9 175 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 ZDHHC21Q8IVQ6 265 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 NSMAFQ92636 917 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 CLPTM1LQ96KA5 538 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 Q96M85 177 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 GPX7Q96SL4 187 aaPredicted RBP13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 MUC13Q9H3R2 512 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 ZNF442Q9H7R0 627 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 SIAEQ9HAT2 523 aa13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 PRPF19Q9UMS4 504 aaKnown RBP13.79□□□□□ -0.2
CTDSP1-209ENST00000488627 HEATR1Q9H583 2144 aaKnown RBP13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 TMEM129A0AVI4 362 aa13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 ACOT8O14734 319 aa13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 FARS2O95363 451 aaKnown RBP13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 RAB36O95755 333 aa13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 RRM2P31350 389 aa13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 RPL4P36578 427 aaKnown RBP13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 CHRNB3Q05901 458 aa13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 CD47Q08722 323 aa13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 EFNB3Q15768 340 aa13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 MSMPQ1L6U9 139 aa13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 CLEC12BQ2HXU8 276 aa13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 MESTQ5EB52 335 aa13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 VHLLQ6RSH7 139 aa13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 FOXL2NBQ6ZUU3 175 aa13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 DPPA2Q7Z7J5 298 aa13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 FNDC8Q8TC99 324 aa13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 FBXO17Q96EF6 278 aa13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 RSRC1Q96IZ7 334 aaKnown RBP13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 RBP7Q96R05 134 aa13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 NRIP3Q9NQ35 241 aa13.78□□□□□ -0.2
CTDSP1-209ENST00000488627 SLC22A23A1A5C7 686 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 UNC119BA6NIH7 251 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 B9A039 149 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 UBOX5O94941 541 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 NDUFB2O95178 105 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 NR2C1P13056 603 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 NPR2P20594 1047 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 MTX3Q5HYI7 312 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms