RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 SH2D2AQ9NP31 389 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 SDHAF3Q9NRP4 125 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 VDAC3Q9Y277 283 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 PIEZO1Q92508 2521 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 PRRC2CQ9Y520 2896 aaKnown RBP10.93□□□□□ -0.66
HDAC6-230ENST00000488543 CCL3P10147 92 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 IL11P20809 199 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 GRPRP30550 384 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 ACVR1BP36896 505 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 APOBEC1P41238 236 aaKnown RBP10.93□□□□□ -0.66
HDAC6-230ENST00000488543 SSR4P51571 173 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 RTP5Q14D33 572 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 SGCBQ16585 318 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 MESTQ5EB52 335 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 ACER2Q5QJU3 275 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 LEG1Q6P5S2 330 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 TMEM81Q6P7N7 255 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 OPN5Q6U736 354 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 WDSUB1Q8N9V3 476 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 OR4M1Q8NGD0 313 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 OR5J2Q8NH18 312 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 OR6S1Q8NH40 331 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 SMPDL3BQ92485 455 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 SLC25A36Q96CQ1 311 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 SOSTQ9BQB4 213 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 ALG8Q9BVK2 526 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 PROK2Q9HC23 129 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 INPP5EQ9NRR6 644 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 FBXL2Q9UKC9 423 aa10.93□□□□□ -0.66
HDAC6-230ENST00000488543 TP53I11O14683 189 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 RNF13O43567 381 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 AKAP8O43823 692 aaKnown RBP10.92□□□□□ -0.66
HDAC6-230ENST00000488543 AHSA1O95433 338 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 FAM157BP0CG42 384 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 ITGA3P26006 1051 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 INPP1P49441 399 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 DIO1P49895 249 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 SLC25A1P53007 311 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 GALEQ14376 348 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 EMC4Q5J8M3 183 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 LINC01590Q5TEZ4 76 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 IGF2-ASQ6U949 168 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 C5orf46Q6UWT4 87 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 SLC39A7Q92504 469 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 RPRD1BQ9NQG5 326 aaKnown RBP10.92□□□□□ -0.66
HDAC6-230ENST00000488543 STMN3Q9NZ72 180 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 ZNF346Q9UL40 294 aaKnown RBP10.92□□□□□ -0.66
HDAC6-230ENST00000488543 TRAV6A0A075B6T7 132 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 DAPL1A0PJW8 107 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 HLA-DPB1P04440 258 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 YES1P07947 543 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 POU4F2Q12837 409 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 SNTA1Q13424 505 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 SLC25A35Q3KQZ1 300 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 YIF1BQ5BJH7 314 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 SLC35D3Q5M8T2 416 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 ALKBH2Q6NS38 261 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 H3F3CQ6NXT2 135 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 ESPNLQ6ZVH7 1005 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 SSX6Q7RTT6 188 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 BEST3Q8N1M1 668 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 SAMD12Q8N8I0 201 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 ARL5BQ96KC2 179 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 MRGPRX4Q96LA9 322 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 SCNM1Q9BWG6 230 aa10.92□□□□□ -0.66
HDAC6-230ENST00000488543 RBFOX1Q9NWB1 397 aaKnown RBP10.92□□□□□ -0.66
HDAC6-230ENST00000488543 APC2O95996 2303 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 ARGFXA6NJG6 315 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 PLPP3O14495 311 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 SEC14L5O43304 696 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 ZNF208O43345 1280 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 TSC22D2O75157 780 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 SERPINI2O75830 405 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 ZNF41P51814 821 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-230ENST00000488543 FOXK1P85037 733 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 CCDC58Q4VC31 144 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 SLC6A19Q695T7 634 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 GPR139Q6DWJ6 353 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 LYPD4Q6UWN0 246 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 ZNF417Q8TAU3 575 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 ORAI1Q96D31 301 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 ZNF587Q96SQ5 575 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-230ENST00000488543 ANGPTL4Q9BY76 406 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 HPF1Q9NWY4 346 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 MRPL39Q9NYK5 338 aaKnown RBP10.91□□□□□ -0.66
HDAC6-230ENST00000488543 C11orf98E9PRG8 122 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 EEF1E1O43324 174 aaKnown RBP10.91□□□□□ -0.66
HDAC6-230ENST00000488543 PYCR1P32322 319 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 HTR2BP41595 481 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 LGALS3BPQ08380 585 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 CLN3Q13286 438 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 ZNF227Q86WZ6 799 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 POMGNT2Q8NAT1 580 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 PRR7Q8TB68 274 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 ZNF519Q8TB69 540 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 PAQR8Q8TEZ7 354 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 TSSK2Q96PF2 358 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 CITED4Q96RK1 184 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 CNN2Q99439 309 aaKnown RBP10.91□□□□□ -0.66
HDAC6-230ENST00000488543 GRHPRQ9UBQ7 328 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms