RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 SLC35F4A4IF30 521 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 CENPBD1B2RD01 187 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 SMAD9O15198 467 aaKnown RBP8.41□□□□□ -1.06
SF3B1-211ENST00000487698 GFRA3O60609 400 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 CEACAM4O75871 244 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 HLA-DPB1P04440 258 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 CD97P48960 835 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 MEOX1P50221 254 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 SUCLG1P53597 346 aaKnown RBP8.41□□□□□ -1.06
SF3B1-211ENST00000487698 ROR2Q01974 943 aaKnown RBP8.41□□□□□ -1.06
SF3B1-211ENST00000487698 CDK5R1Q15078 307 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 PCK2Q16822 640 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 CCDC58Q4VC31 144 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 DPY19L4Q7Z388 723 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 TMEM251Q8N6I4 163 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 ADAD1Q96M93 576 aaKnown RBP8.41□□□□□ -1.06
SF3B1-211ENST00000487698 UCN2Q96RP3 112 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 NAA11Q9BSU3 229 aaPredicted RBP8.41□□□□□ -1.06
SF3B1-211ENST00000487698 TMED9Q9BVK6 235 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 CDADC1Q9BWV3 514 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 NXF2Q9GZY0 626 aaKnown RBP8.41□□□□□ -1.06
SF3B1-211ENST00000487698 MRM2Q9UI43 246 aaKnown RBP8.41□□□□□ -1.06
SF3B1-211ENST00000487698 GNG8Q9UK08 70 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 KLK13Q9UKR3 277 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 COA3Q9Y2R0 106 aaPredicted RBP8.41□□□□□ -1.06
SF3B1-211ENST00000487698 TMEM14AQ9Y6G1 99 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 A3GALT2U3KPV4 340 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 DCHS1Q96JQ0 3298 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 DCDC2BA2VCK2 349 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 METTL15A6NJ78 407 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 FAM166BA8MTA8 275 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 KLRC4-KLRK1H3BQV0 150 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 GABRPO00591 440 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 EIF1AYO14602 144 aaKnown RBP8.41□□□□□ -1.06
SF3B1-211ENST00000487698 PHYHO14832 338 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 KHDRBS3O75525 346 aaKnown RBP8.41□□□□□ -1.06
SF3B1-211ENST00000487698 IGHG1P01857 330 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 HRGP04196 525 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 CD1AP06126 327 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 CD46P15529 392 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 POU3F2P20265 443 aaPredicted RBP8.41□□□□□ -1.06
SF3B1-211ENST00000487698 RPS27P42677 84 aaKnown RBP8.41□□□□□ -1.06
SF3B1-211ENST00000487698 MAGEA5P43359 124 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 TGM4P49221 684 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 STARP49675 285 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 ENTPD1P49961 510 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 TNFSF10P50591 281 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 SIRPAP78324 504 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 ARG2P78540 354 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 EGR3Q06889 387 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 SLC17A1Q14916 467 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 THEM4Q5T1C6 240 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 HBMQ6B0K9 141 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 ABLIM2Q6H8Q1 611 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 C22orf42Q6IC83 251 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 ARL9Q6T311 187 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 TMEM91Q6ZNR0 172 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 PLEKHG7Q6ZR37 379 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 CREB3L2Q70SY1 520 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 KCTD20Q7Z5Y7 419 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 FDCSPQ8NFU4 85 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 OR2V1Q8NHB1 315 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 FOXN4Q96NZ1 517 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 AMELYQ99218 206 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 SF3B5Q9BWJ5 86 aaKnown RBP8.41□□□□□ -1.06
SF3B1-211ENST00000487698 QPCTLQ9NXS2 382 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 KCNG2Q9UJ96 466 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 LAMP5Q9UJQ1 280 aa8.41□□□□□ -1.06
SF3B1-211ENST00000487698 CEP295Q9C0D2 2601 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 APC2O95996 2303 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 IGHV3-15A0A0B4J1V0 119 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 ZNF593O00488 134 aaPredicted RBP8.4□□□□□ -1.06
SF3B1-211ENST00000487698 EFSO43281 561 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 UPK3AO75631 287 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 SC5DO75845 299 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 SULT1C4O75897 302 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 RGS9O75916 674 aaPredicted RBP8.4□□□□□ -1.06
SF3B1-211ENST00000487698 HLA-DQA2P01906 255 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 ENPP1P22413 925 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 RPS19P39019 145 aaKnown RBP8.4□□□□□ -1.06
SF3B1-211ENST00000487698 LHX2P50458 406 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 CCL11P51671 97 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 GBX2P52951 348 aaPredicted RBP8.4□□□□□ -1.06
SF3B1-211ENST00000487698 CARD18P57730 90 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 ADAM8P78325 824 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 CAMK2DQ13557 499 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 INSL4Q14641 139 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 TRAM1Q15629 374 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 MOGQ16653 247 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 ZNF404Q494X3 552 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 ZNF766Q5HY98 468 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 TEX30Q5JUR7 227 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 RPL22L1Q6P5R6 122 aaKnown RBP8.4□□□□□ -1.06
SF3B1-211ENST00000487698 TRILQ7L0X0 811 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 TMEM123Q8N131 208 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 OR9K2Q8NGE7 335 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 OR10D3Q8NH80 312 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 SMIM19Q96E16 107 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 KCTD7Q96MP8 289 aa8.4□□□□□ -1.06
SF3B1-211ENST00000487698 RBP7Q96R05 134 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms