RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 KLHL21Q9UJP4 597 aa11.2□□□□□ -0.62
PRDM2-208ENST00000487453 USP9XQ93008 2570 aaPredicted RBP11.2□□□□□ -0.62
PRDM2-208ENST00000487453 CACNA1CQ13936 2221 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 HELZ2Q9BYK8 2649 aaKnown RBP11.19□□□□□ -0.62
PRDM2-208ENST00000487453 IGKV1D-43A0A0B4J1Z2 117 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 AHCYL1O43865 530 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 SLC16A7O60669 478 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 ZNF3P17036 446 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 PEX2P28328 305 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 CENPAP49450 140 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 CRMP1Q14194 572 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 PPA1Q15181 289 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 PTGES3Q15185 160 aaKnown RBP11.19□□□□□ -0.62
PRDM2-208ENST00000487453 TAB1Q15750 504 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 TBRG1Q3YBR2 411 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 TIMM23BQ5SRD1 257 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 C10orf128Q5T292 105 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 CYB561A3Q8NBI2 242 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 SLC37A3Q8NCC5 494 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 NMD3Q96D46 503 aaKnown RBP11.19□□□□□ -0.62
PRDM2-208ENST00000487453 MUCL1Q96DR8 90 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 FOXN4Q96NZ1 517 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 WFIKKN1Q96NZ8 548 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 TSSK2Q96PF2 358 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 USB1Q9BQ65 265 aaKnown RBP11.19□□□□□ -0.62
PRDM2-208ENST00000487453 PRRG3Q9BZD7 231 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 NUAK2Q9H093 628 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 SEC61A2Q9H9S3 476 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 SLC25A19Q9HC21 320 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 SLC24A3Q9HC58 644 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 SLC17A5Q9NRA2 495 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 TMEM38BQ9NVV0 291 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 ZNF226Q9NYT6 803 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 VSX1Q9NZR4 365 aaPredicted RBP11.19□□□□□ -0.62
PRDM2-208ENST00000487453 AMDHD2Q9Y303 409 aa11.19□□□□□ -0.62
PRDM2-208ENST00000487453 RRP15Q9Y3B9 282 aaKnown RBP11.19□□□□□ -0.62
PRDM2-208ENST00000487453 DOPEY1Q5JWR5 2465 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 CASKO14936 926 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 FARS2O95363 451 aaKnown RBP11.18□□□□□ -0.62
PRDM2-208ENST00000487453 CTLA4P16410 223 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 PAICSP22234 425 aaKnown RBP11.18□□□□□ -0.62
PRDM2-208ENST00000487453 CRABP1P29762 137 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 CDAP32320 146 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 GUCA1AP43080 201 aaPredicted RBP11.18□□□□□ -0.62
PRDM2-208ENST00000487453 GIPRP48546 466 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 TUBA1BP68363 451 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 TUBA4AP68366 448 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 CDK5Q00535 292 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 DBPQ10586 325 aaPredicted RBP11.18□□□□□ -0.62
PRDM2-208ENST00000487453 NPRL3Q12980 569 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 ZIK1Q3SY52 487 aaPredicted RBP11.18□□□□□ -0.62
PRDM2-208ENST00000487453 HIST2H2BCQ6DN03 193 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 ACSM5Q6NUN0 579 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 SLC25A47Q6Q0C1 308 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 TUBA1AQ71U36 451 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 P2RY8Q86VZ1 359 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 SLC22A24Q8N4F4 322 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 OR9Q1Q8NGQ5 310 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 NANOS1Q8WY41 292 aaKnown RBP11.18□□□□□ -0.62
PRDM2-208ENST00000487453 HSD17B8Q92506 261 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 BCL2L2Q92843 193 aaPredicted RBP11.18□□□□□ -0.62
PRDM2-208ENST00000487453 MUS81Q96NY9 551 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 SLC38A2Q96QD8 506 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 SNX18Q96RF0 628 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 SPOCK3Q9BQ16 436 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 GABARAPL3Q9BY60 117 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 NELFAQ9H3P2 528 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 RNPEPL1Q9HAU8 725 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 CMC2Q9NRP2 79 aa11.18□□□□□ -0.62
PRDM2-208ENST00000487453 NKX1-2Q9UD57 310 aaPredicted RBP11.18□□□□□ -0.62
PRDM2-208ENST00000487453 OR6C68A6NDL8 312 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 FAM183AA6NL82 134 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 ZAR1LA6NP61 321 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 SURF4O15260 269 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 KHDRBS3O75525 346 aaKnown RBP11.17□□□□□ -0.62
PRDM2-208ENST00000487453 WNT11O96014 354 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 HMGN1P05114 100 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 THBDP07204 575 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 OR8G3PP0DMU2 310 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 CD79AP11912 226 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 EPHA2P29317 976 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 POLR2IP36954 125 aaKnown RBP11.17□□□□□ -0.62
PRDM2-208ENST00000487453 ZNF133P52736 654 aaPredicted RBP11.17□□□□□ -0.62
PRDM2-208ENST00000487453 SLC34A1Q06495 639 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 ETFDHQ16134 617 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 SGCAQ16586 387 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 FBXW10Q5XX13 1052 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 C22orf34Q6ZV56 151 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.17□□□□□ -0.62
PRDM2-208ENST00000487453 LRRC18Q8N456 261 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 GALNT4Q8N4A0 578 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 NPEPL1Q8NDH3 523 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 PROKR2Q8NFJ6 384 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 FAM222BQ8WU58 562 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 DACH2Q96NX9 599 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 SLC29A1Q99808 456 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 SH3GL3Q99963 347 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 TOR3AQ9H497 397 aa11.17□□□□□ -0.62
PRDM2-208ENST00000487453 SRA1Q9HD15 236 aaKnown RBP11.17□□□□□ -0.62
PRDM2-208ENST00000487453 TVP23BQ9NYZ1 205 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms