RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 MDGA1Q8NFP4 955 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 OR51D1Q8NGF3 324 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 OR9A4Q8NGU2 314 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 OR1F12Q8NHA8 337 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 SAP25Q8TEE9 199 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 EXTL1Q92935 676 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 CREB3L1Q96BA8 519 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 ELSPBP1Q96BH3 223 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 ANKRD9Q96BM1 317 aaPredicted RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 CTHRC1Q96CG8 243 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 XPO6Q96QU8 1125 aaKnown RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 FMO2Q99518 471 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 AIF1LQ9BQI0 150 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 BEX2Q9BXY8 128 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 UCK2Q9BZX2 261 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 RHOFQ9HBH0 211 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 EML4Q9HC35 981 aaKnown RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 FZD3Q9NPG1 666 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 GSN-AS1Q9NRJ2 163 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 NUP50Q9UKX7 468 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 CTNND2Q9UQB3 1225 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 RNF6Q9Y252 685 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 POLDIP2Q9Y2S7 368 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 ACOT9Q9Y305 439 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 TIMM10BQ9Y5J6 103 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 PEX16Q9Y5Y5 336 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 SLC22A7Q9Y694 548 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 DIDO1Q9BTC0 2240 aaKnown RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 COL27A1Q8IZC6 1860 aaPredicted RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 NUP210Q8TEM1 1887 aaPredicted RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 ANK3Q12955 4377 aaKnown RBP4.91□□□□□ -1.62
SF1-217ENST00000486960 MYH9P35579 1960 aaKnown RBP4.91□□□□□ -1.62
SF1-217ENST00000486960 TEX13DA0A0J9YY54 714 aaPredicted RBP4.91□□□□□ -1.62
SF1-217ENST00000486960 A0A1B0GVI7 797 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 ANTXRLA6NF34 631 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 LRRC30A6NM36 301 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 B5MCH6 92 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 hCG_2039718K7EN88 272 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 TCAPO15273 167 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 TGOLN2O43493 480 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 SYT7O43581 403 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 CHP2O43745 196 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 KIAA0513O60268 411 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 UGT1A9O60656 530 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 DEAF1O75398 565 aaPredicted RBP4.91□□□□□ -1.62
SF1-217ENST00000486960 GLSO94925 669 aaPredicted RBP4.91□□□□□ -1.62
SF1-217ENST00000486960 SEC24AO95486 1093 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 KRT75O95678 551 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 IL18BPO95998 194 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 IFNA2P01563 188 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 HLA-HP01893 362 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 ALDOBP05062 364 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 CT45A8P0DMV1 189 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 CT45A9P0DMV2 189 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 ANXA3P12429 323 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 CREB1P16220 341 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 ZNF12P17014 697 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 KITLGP21583 273 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 TBXA2RP21731 343 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 IVDP26440 423 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 ARL2P36404 184 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 RBMXP38159 391 aaKnown RBP4.91□□□□□ -1.62
SF1-217ENST00000486960 SLCO1A2P46721 670 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 CX3CR1P49238 355 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 EFNB2P52799 333 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 ESRRGP62508 458 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 SELENBP1Q13228 472 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 ITGA9Q13797 1035 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 LTB4RQ15722 352 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 HLA-BQ31612 363 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 TMEM176BQ3YBM2 270 aaPredicted RBP4.91□□□□□ -1.62
SF1-217ENST00000486960 ACSM3Q53FZ2 586 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 CT45A2Q5DJT8 189 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 ARL13AQ5H913 290 aaPredicted RBP4.91□□□□□ -1.62
SF1-217ENST00000486960 ARMCX4Q5H9R4 360 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 AGAP7PQ5VUJ5 663 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 LYPLAL1Q5VWZ2 237 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 SYPL2Q5VXT5 272 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 ZFP1Q6P2D0 407 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 FAM199XQ6PEV8 388 aaPredicted RBP4.91□□□□□ -1.62
SF1-217ENST00000486960 SPESP1Q6UW49 350 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 RBMS3Q6XE24 437 aaKnown RBP4.91□□□□□ -1.62
SF1-217ENST00000486960 ZNF720Q7Z2F6 126 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 WDR53Q7Z5U6 358 aaPredicted RBP4.91□□□□□ -1.62
SF1-217ENST00000486960 ITIH5Q86UX2 942 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 PIM3Q86V86 326 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 KCNMB4Q86W47 210 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 UNC93AQ86WB7 457 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 DMRTC2Q8IXT2 367 aaPredicted RBP4.91□□□□□ -1.62
SF1-217ENST00000486960 C2orf73Q8N5S3 287 aaPredicted RBP4.91□□□□□ -1.62
SF1-217ENST00000486960 ATP6V0D2Q8N8Y2 350 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 DTX3Q8N9I9 347 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 OR6M1Q8NGM8 313 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 OR6K2Q8NGY2 324 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 OR4Q3Q8NH05 313 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 OR4L1Q8NH43 312 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 SSMEM1Q8WWF3 244 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 NUS1Q96E22 293 aa4.91□□□□□ -1.62
SF1-217ENST00000486960 ZNF837Q96EG3 531 aaPredicted RBP4.91□□□□□ -1.62
SF1-217ENST00000486960 AGAP4Q96P64 663 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms