RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 BARHL1Q9BZE3 327 aa10.39□□□□□ -0.75
PRKCB-207ENST00000486868 ZCCHC4Q9H5U6 513 aa10.39□□□□□ -0.75
PRKCB-207ENST00000486868 SNTG1Q9NSN8 517 aa10.39□□□□□ -0.75
PRKCB-207ENST00000486868 DEPPQ9NTK1 212 aa10.39□□□□□ -0.75
PRKCB-207ENST00000486868 FAM86C1Q9NVL1 165 aa10.39□□□□□ -0.75
PRKCB-207ENST00000486868 MRPL22Q9NWU5 206 aaKnown RBP10.39□□□□□ -0.75
PRKCB-207ENST00000486868 MRM2Q9UI43 246 aaKnown RBP10.39□□□□□ -0.75
PRKCB-207ENST00000486868 GNG8Q9UK08 70 aa10.39□□□□□ -0.75
PRKCB-207ENST00000486868 ZNF281Q9Y2X9 895 aa10.39□□□□□ -0.75
PRKCB-207ENST00000486868 UGT2A1Q9Y4X1 527 aa10.39□□□□□ -0.75
PRKCB-207ENST00000486868 AHCTF1Q8WYP5 2266 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 PCSK5Q92824 1860 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 A0A0J9YW62 118 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 TRBV2A0A0J9YWF9 115 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 OR5H15A6NDH6 313 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 TVP23AA6NH52 213 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 ZNF726A6NNF4 738 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 FAM171A2A8MVW0 826 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 LOC110117498-PIK3R3F6TDL0 507 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 CASKO14936 926 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 WDPCPO95876 746 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 UCHL1P09936 223 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 ZNF823P16415 610 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 MYL9P24844 172 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 CD97P48960 835 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 NOVA1P51513 510 aaKnown RBP10.38□□□□□ -0.75
PRKCB-207ENST00000486868 GFRA1P56159 465 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 FOXK1P85037 733 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 SLC3A1Q07837 685 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 RASGEF1BQ0VAM2 473 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 SLC17A1Q14916 467 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 INAQ16352 499 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 BCL2A1Q16548 175 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 ACSM3Q53FZ2 586 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 LIPNQ5VXI9 398 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 SLC25A25Q6KCM7 469 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 SLC25A47Q6Q0C1 308 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 KDM8Q8N371 416 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 OR5M1Q8NGP8 315 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 OR14L1PQ8NHC6 308 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 RNF128Q8TEB7 428 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 RNF166Q96A37 237 aaPredicted RBP10.38□□□□□ -0.75
PRKCB-207ENST00000486868 TXNDC15Q96J42 360 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 SFXN2Q96NB2 322 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 DCBLD2Q96PD2 775 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 C6orf62Q9GZU0 229 aaPredicted RBP10.38□□□□□ -0.75
PRKCB-207ENST00000486868 TMEM185BQ9H7F4 350 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 SLC24A3Q9HC58 644 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 SMURF1Q9HCE7 757 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 TIGARQ9NQ88 270 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 ACOXLQ9NUZ1 547 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 MED29Q9NX70 200 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 PAQR5Q9NXK6 330 aaPredicted RBP10.38□□□□□ -0.75
PRKCB-207ENST00000486868 PLEKHB1Q9UF11 243 aaPredicted RBP10.38□□□□□ -0.75
PRKCB-207ENST00000486868 RCE1Q9Y256 329 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 COA3Q9Y2R0 106 aaPredicted RBP10.38□□□□□ -0.75
PRKCB-207ENST00000486868 PCNX3Q9H6A9 2034 aa10.38□□□□□ -0.75
PRKCB-207ENST00000486868 MPDZO75970 2070 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 A0A0G2JMM0 328 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 A0A1W2PPB8 328 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 A0A1W2PRS3 328 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 ISPDA4D126 451 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 TMEM212A6NML5 194 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 KIR3DP1A8MWS1 328 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 G3V3Y1 287 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 KLRC4-KLRK1H3BQV0 150 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 NME2P1O60361 137 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 GLSO94925 669 aaPredicted RBP10.37□□□□□ -0.75
PRKCB-207ENST00000486868 HLA-DQA2P01906 255 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 RAF1P04049 648 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 SP1P08047 785 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 CD46P15529 392 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 NME2P22392 152 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 PTBP1P26599 531 aaKnown RBP eCLIP10.37□□□□□ -0.751e-6■■□□□ 12.2
PRKCB-207ENST00000486868 MAPK3P27361 379 aaPredicted RBP10.37□□□□□ -0.75
PRKCB-207ENST00000486868 LAP3P28838 519 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 CLRN1P58418 232 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 RPS11P62280 158 aaKnown RBP eCLIP10.37□□□□□ -0.75
PRKCB-207ENST00000486868 ADAM8P78325 824 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 C19orf57Q0VDD7 668 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 HNRNPA0Q13151 305 aaKnown RBP10.37□□□□□ -0.75
PRKCB-207ENST00000486868 CAMK2BQ13554 666 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 ZMAT1Q5H9K5 638 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 SPANXN2Q5MJ10 180 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 C10orf128Q5T292 105 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 SPINK14Q6IE38 97 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 MZT2AQ6P582 158 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 C16orf87Q6PH81 154 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 METAP1DQ6UB28 335 aaPredicted RBP10.37□□□□□ -0.75
PRKCB-207ENST00000486868 LYPD4Q6UWN0 246 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 IGFL2Q6UWQ7 119 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 FOXL2NBQ6ZUU3 175 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 CREB3L2Q70SY1 520 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 CEACAM19Q7Z692 300 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 RFLNBQ8N5W9 214 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 YIPF7Q8N8F6 280 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 OR52N5Q8NH56 324 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 OR2V1Q8NHB1 315 aa10.37□□□□□ -0.75
PRKCB-207ENST00000486868 SMAP2Q8WU79 429 aaPredicted RBP10.37□□□□□ -0.75
PRKCB-207ENST00000486868 TMEM54Q969K7 222 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms