RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 FAM157BP0CG42 384 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 EFNB3Q15768 340 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 SLC36A2Q495M3 483 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 ARMC4Q5T2S8 1044 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 MBOAT2Q6ZWT7 520 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 ICA1LQ8NDH6 482 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 OR52J3Q8NH60 311 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 LIPHQ8WWY8 451 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 ZNF75AQ96N20 296 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 RBP7Q96R05 134 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 CDRT15Q96T59 188 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 SYT3Q9BQG1 590 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 RAB1BQ9H0U4 201 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 TPK1Q9H3S4 243 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 ZNF442Q9H7R0 627 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 NMNAT1Q9HAN9 279 aaPredicted RBP15.25■□□□□ 0.03
COL6A1-204ENST00000486023 DUSP13Q9UII6 198 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 HIF3AQ9Y2N7 669 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 ENPP4Q9Y6X5 453 aa15.25■□□□□ 0.03
COL6A1-204ENST00000486023 NSD1Q96L73 2696 aaPredicted RBP15.24■□□□□ 0.03
COL6A1-204ENST00000486023 PDE5AO76074 875 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 SERPINA5P05154 406 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 H1F0P07305 194 aaKnown RBP15.24■□□□□ 0.03
COL6A1-204ENST00000486023 ZNF35P13682 527 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 CCNOP22674 350 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 PDLIM4P50479 330 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 RPL27P61353 136 aaKnown RBP15.24■□□□□ 0.03
COL6A1-204ENST00000486023 ERVK-25P63136 954 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 GGTLC2Q14390 218 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 KRT72Q14CN4 511 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 HIST3H3Q16695 136 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 PIGWQ7Z7B1 504 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 ZNF584Q8IVC4 421 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 RNF113BQ8IZP6 322 aaKnown RBP15.24■□□□□ 0.03
COL6A1-204ENST00000486023 FAM86B1Q8N7N1 296 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 SLC30A7Q8NEW0 376 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 C10orf105Q8TEF2 133 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 FAM46AQ96IP4 442 aaKnown RBP15.24■□□□□ 0.03
COL6A1-204ENST00000486023 TSPAN32Q96QS1 320 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 DOK1Q99704 481 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 CDH20Q9HBT6 801 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 STX18Q9P2W9 335 aaKnown RBP15.24■□□□□ 0.03
COL6A1-204ENST00000486023 TAGLN3Q9UI15 199 aa15.24■□□□□ 0.03
COL6A1-204ENST00000486023 SAMD4AQ9UPU9 718 aaKnown RBP15.24■□□□□ 0.03
COL6A1-204ENST00000486023 HIVEP2P31629 2446 aa15.23■□□□□ 0.03
COL6A1-204ENST00000486023 IGKV1D-43A0A0B4J1Z2 117 aa15.23■□□□□ 0.03
COL6A1-204ENST00000486023 IQCMA0A1B0GVH7 501 aa15.23■□□□□ 0.03
COL6A1-204ENST00000486023 TMEM129A0AVI4 362 aa15.23■□□□□ 0.03
COL6A1-204ENST00000486023 H7C1C5 153 aa15.23■□□□□ 0.03
COL6A1-204ENST00000486023 PRSS23O95084 383 aa15.23■□□□□ 0.03
COL6A1-204ENST00000486023 ERCC1P07992 297 aaPredicted RBP15.23■□□□□ 0.03
COL6A1-204ENST00000486023 SLC25A16P16260 332 aa15.23■□□□□ 0.03
COL6A1-204ENST00000486023 LCN6P62502 163 aa15.23■□□□□ 0.03
COL6A1-204ENST00000486023 HSF2Q03933 536 aa15.23■□□□□ 0.03
COL6A1-204ENST00000486023 PLP2Q04941 152 aa15.23■□□□□ 0.03
COL6A1-204ENST00000486023 KRTAP1-1Q07627 177 aa15.23■□□□□ 0.03
COL6A1-204ENST00000486023 ALKBH6Q3KRA9 238 aa15.23■□□□□ 0.03
COL6A1-204ENST00000486023 PODNL1Q6PEZ8 512 aa15.23■□□□□ 0.03
COL6A1-204ENST00000486023 TSEN54Q7Z6J9 526 aaKnown RBP15.23■□□□□ 0.03
COL6A1-204ENST00000486023 LRP11Q86VZ4 500 aa15.23■□□□□ 0.03
COL6A1-204ENST00000486023 FOXN4Q96NZ1 517 aa15.23■□□□□ 0.03
COL6A1-204ENST00000486023 MRPL37Q9BZE1 423 aaKnown RBP15.23■□□□□ 0.03
COL6A1-204ENST00000486023 DENND2DQ9H6A0 471 aaPredicted RBP15.23■□□□□ 0.03
COL6A1-204ENST00000486023 CCNB1IP1Q9NPC3 277 aa15.23■□□□□ 0.03
COL6A1-204ENST00000486023 DCAF13Q9NV06 445 aaKnown RBP15.23■□□□□ 0.03
COL6A1-204ENST00000486023 FBXL3Q9UKT7 428 aa15.23■□□□□ 0.03
COL6A1-204ENST00000486023 A0A1W2PPL8 197 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 HTR3EA5X5Y0 456 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 CDC42EP2O14613 210 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 DCTN3O75935 186 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 LCKP06239 509 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 TSPAN19P0C672 248 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 GUCA1AP43080 201 aaPredicted RBP15.22■□□□□ 0.03
COL6A1-204ENST00000486023 SLC9A3P48764 834 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 PPOXP50336 477 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 MSMPQ1L6U9 139 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 IQCCQ4KMZ1 466 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 PAQR4Q8N4S7 273 aaPredicted RBP15.22■□□□□ 0.03
COL6A1-204ENST00000486023 SLC7A13Q8TCU3 470 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 KCNK17Q96T54 332 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 PIMREGQ9BSJ6 248 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 RERGLQ9H628 205 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 SIAEQ9HAT2 523 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 NDUFAF4Q9P032 175 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 GRHPRQ9UBQ7 328 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 IL20RAQ9UHF4 553 aa15.22■□□□□ 0.03
COL6A1-204ENST00000486023 FN1P02751 2386 aaKnown RBP15.22■□□□□ 0.03
COL6A1-204ENST00000486023 NAV3Q8IVL0 2385 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 A0A1W2PPW3 197 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 CENPBD1B2RD01 187 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 CSF3P09919 207 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 DAOP14920 347 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 RHCEP18577 417 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 APEX1P27695 318 aaKnown RBP15.21■□□□□ 0.03
COL6A1-204ENST00000486023 APLNRP35414 380 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 GLRXP35754 106 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 ALDH3B1P43353 468 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 VLDLRP98155 873 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 MAD2L1BPQ15013 274 aaPredicted RBP15.21■□□□□ 0.03
COL6A1-204ENST00000486023 TAF11Q15544 211 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms