RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 ABHD12BQ7Z5M8 362 aaPredicted RBP10.39□□□□□ -0.75
APTX-227ENST00000485479 LINC00471Q8N535 108 aa10.39□□□□□ -0.75
APTX-227ENST00000485479 OR51L1Q8NGJ5 315 aa10.39□□□□□ -0.75
APTX-227ENST00000485479 OR9Q1Q8NGQ5 310 aa10.39□□□□□ -0.75
APTX-227ENST00000485479 BCL2L2Q92843 193 aaPredicted RBP10.39□□□□□ -0.75
APTX-227ENST00000485479 NMD3Q96D46 503 aaKnown RBP10.39□□□□□ -0.75
APTX-227ENST00000485479 PLPPR2Q96GM1 343 aa10.39□□□□□ -0.75
APTX-227ENST00000485479 LRR1Q96L50 414 aa10.39□□□□□ -0.75
APTX-227ENST00000485479 MUS81Q96NY9 551 aa10.39□□□□□ -0.75
APTX-227ENST00000485479 NUAK2Q9H093 628 aa10.39□□□□□ -0.75
APTX-227ENST00000485479 ZNF556Q9HAH1 456 aa10.39□□□□□ -0.75
APTX-227ENST00000485479 B3GAT2Q9NPZ5 323 aa10.39□□□□□ -0.75
APTX-227ENST00000485479 RPRD1BQ9NQG5 326 aaKnown RBP10.39□□□□□ -0.75
APTX-227ENST00000485479 ZNF224Q9NZL3 707 aa10.39□□□□□ -0.75
APTX-227ENST00000485479 POFUT2Q9Y2G5 429 aa10.39□□□□□ -0.75
APTX-227ENST00000485479 SLC25A15Q9Y619 301 aa10.39□□□□□ -0.75
APTX-227ENST00000485479 APCP25054 2843 aa10.39□□□□□ -0.75
APTX-227ENST00000485479 OR6C68A6NDL8 312 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 ARRDC5A6NEK1 342 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 FAM183AA6NL82 134 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 A6NNC1 897 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 RPL36A-HNRNPH2H7BZ11 118 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 M0R1B8 84 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 EI24O14681 340 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 CASKO14936 926 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 SLC16A7O60669 478 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 SCG5P05408 212 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 CLUP10909 449 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 HOXC12P31275 282 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 TGFBR3Q03167 851 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 RCN1Q15293 331 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 TAF11Q15544 211 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 LRRC36Q1X8D7 754 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 TIMM23BQ5SRD1 257 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 ACSM5Q6NUN0 579 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 ZFP1Q6P2D0 407 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 FAHD1Q6P587 224 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 JAZF1Q86VZ6 243 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 TEX47Q8TBZ9 253 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 ZNRF4Q8WWF5 429 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 MS4A3Q96HJ5 214 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 DACH2Q96NX9 599 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 HDHD5Q9BXW7 423 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 MED20Q9H944 212 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 SLC17A5Q9NRA2 495 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 PAPOLBQ9NRJ5 636 aaKnown RBP10.38□□□□□ -0.75
APTX-227ENST00000485479 KRT84Q9NSB2 600 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 UGT2A1Q9Y4X1 527 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 ITPR2Q14571 2701 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 POLQO75417 2590 aa10.38□□□□□ -0.75
APTX-227ENST00000485479 NPIPB13A6NJU9 1138 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 OR6C65A6NJZ3 312 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 NPIPB4C9JG80 1138 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 CD79AP11912 226 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 ANXA8P13928 327 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 HOXB6P17509 224 aaKnown RBP10.37□□□□□ -0.75
APTX-227ENST00000485479 GSTM3P21266 225 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 CENPAP49450 140 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.37□□□□□ -0.75
APTX-227ENST00000485479 SGCAQ16586 387 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 MEP1BQ16820 701 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 OR7E24Q6IFN5 339 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 ADAM5Q6NVV9 412 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 ANKRD16Q6P6B7 361 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 UGT2A3Q6UWM9 527 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 HIPK1Q86Z02 1210 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 SKA3Q8IX90 412 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 PQLC1Q8N2U9 271 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 OR2T33Q8NG76 320 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 NEUROG1Q92886 237 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 OTULINQ96BN8 352 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 MUCL1Q96DR8 90 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 LIME1Q9H400 295 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 SRA1Q9HD15 236 aaKnown RBP10.37□□□□□ -0.75
APTX-227ENST00000485479 EMC7Q9NPA0 242 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 TMEM38BQ9NVV0 291 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 ZNF226Q9NYT6 803 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 TMEFF2Q9UIK5 374 aaPredicted RBP10.37□□□□□ -0.75
APTX-227ENST00000485479 COA3Q9Y2R0 106 aaPredicted RBP10.37□□□□□ -0.75
APTX-227ENST00000485479 A6NIZ1 184 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 OSMP13725 252 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 IGFBP5P24593 272 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 UBE2NP61088 152 aaKnown RBP10.37□□□□□ -0.75
APTX-227ENST00000485479 RAP1BP61224 184 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 RAP1AP62834 184 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 ELF3P78545 371 aaPredicted RBP10.37□□□□□ -0.75
APTX-227ENST00000485479 BSPH1Q075Z2 132 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 CRMP1Q14194 572 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 PGGHGQ32M88 737 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 ZNF362Q5T0B9 420 aaPredicted RBP10.37□□□□□ -0.75
APTX-227ENST00000485479 SLC25A47Q6Q0C1 308 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 ZNF771Q7L3S4 317 aaPredicted RBP10.37□□□□□ -0.75
APTX-227ENST00000485479 MDP1Q86V88 176 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 OR6V1Q8N148 313 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 SLC22A24Q8N4F4 322 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 CBR4Q8N4T8 237 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 FAM222BQ8WU58 562 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 RBP7Q96R05 134 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 HCAR1Q9BXC0 346 aa10.37□□□□□ -0.75
APTX-227ENST00000485479 NDEL1Q9GZM8 345 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms