RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 ERV3-1Q14264 604 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 KIR2DS3Q14952 304 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 MEP1BQ16820 701 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 FAM199XQ6PEV8 388 aaPredicted RBP13.93□□□□□ -0.18
RXRA-203ENST00000484822 RFLNAQ6ZTI6 216 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 TMPRSS7Q7RTY8 843 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 PTDSS2Q9BVG9 487 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 SUCNR1Q9BXA5 334 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 SLCO5A1Q9H2Y9 848 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 FN3KRPQ9HA64 309 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 UBQLN4Q9NRR5 601 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 OSGIN2Q9Y236 505 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 NUMBLQ9Y6R0 609 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 MPPED1O15442 326 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 PHF1O43189 567 aaPredicted RBP13.93□□□□□ -0.18
RXRA-203ENST00000484822 MT-ND4LP03901 98 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 ZNF728P0DKX0 622 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 HMGA1P17096 107 aaKnown RBP13.93□□□□□ -0.18
RXRA-203ENST00000484822 BCKDHBP21953 392 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 SLCO4C1Q6ZQN7 724 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 C1orf87Q8N0U7 546 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 NEURL3Q96EH8 262 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 PHF7Q9BWX1 381 aaPredicted RBP13.93□□□□□ -0.18
RXRA-203ENST00000484822 C1QTNF3Q9BXJ4 246 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 NDUFB11Q9NX14 153 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 TAS2R5Q9NYW4 299 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 CGGBP1Q9UFW8 167 aaPredicted RBP13.93□□□□□ -0.18
RXRA-203ENST00000484822 CCL26Q9Y258 94 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 CSAG2Q9Y5P2 127 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 LOC100289279A0A1B0GTE1 492 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 S100A8P05109 93 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 P2RY2P41231 377 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 MRPL58Q14197 206 aaKnown RBP13.93□□□□□ -0.18
RXRA-203ENST00000484822 EID2Q8N6I1 236 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 OR5M8Q8NGP6 311 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 UCN3Q969E3 161 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 VPS25Q9BRG1 176 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 VN1R3Q9BXE9 311 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 TMEM38AQ9H6F2 299 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 CUTCQ9NTM9 273 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 ACER3Q9NUN7 267 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 FBXL4Q9UKA2 621 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 MOKQ9UQ07 419 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 SSC5DA1L4H1 1573 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 TRAV20A0A0B4J274 112 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 A0A0J9YY10 115 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 ZC3H12DA2A288 527 aaKnown RBP13.93□□□□□ -0.18
RXRA-203ENST00000484822 DCTN6O00399 190 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 TAPBPO15533 448 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 ABOP16442 354 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 C2orf76Q3KRA6 126 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 XKR7Q5GH72 579 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 CDCA4Q9BXL8 241 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 WDR76Q9H967 626 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 WBP1LQ9NX94 342 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 RPH3ALQ9UNE2 315 aa13.93□□□□□ -0.18
RXRA-203ENST00000484822 A0A1B0GWA3 101 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 UMAD1C9J7I0 102 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 HSPB6O14558 160 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 SELENOFO60613 162 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 B3GALT4O96024 378 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 MTHFD2P13995 350 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 NME1P15531 152 aaKnown RBP13.92□□□□□ -0.18
RXRA-203ENST00000484822 CLDN20P56880 219 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 SMAD4Q13485 552 aaKnown RBP13.92□□□□□ -0.18
RXRA-203ENST00000484822 HABP2Q14520 560 aaPredicted RBP13.92□□□□□ -0.18
RXRA-203ENST00000484822 SHHQ15465 462 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 FAM58AQ8N1B3 248 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 OR1M1Q8NGA1 313 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 OR9K2Q8NGE7 335 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 HSD17B8Q92506 261 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 ZNF75AQ96N20 296 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 UHRF2Q96PU4 802 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 USB1Q9BQ65 265 aaKnown RBP13.92□□□□□ -0.18
RXRA-203ENST00000484822 ECM29Q5VYK3 1845 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 DOCK1Q14185 1865 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 ZNF195O14628 629 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 HPNP05981 417 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 PIPP12273 146 aaPredicted RBP13.92□□□□□ -0.18
RXRA-203ENST00000484822 LPCAT3Q6P1A2 487 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 LINC00346Q8IVM7 164 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 OR2G3Q8NGZ4 309 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 YIPF6Q96EC8 236 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 TIMM29Q9BSF4 260 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 EXOSC3Q9NQT5 275 aaKnown RBP13.92□□□□□ -0.18
RXRA-203ENST00000484822 PPT2Q9UMR5 302 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 ANKRD30BLA7E2S9 258 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 ZNF724A8MTY0 619 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 OR2F2O95006 317 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 CLDN1O95832 211 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 CBX7O95931 251 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 LPLP06858 475 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 HBG1P69891 147 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 HBG2P69892 147 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 BAXQ07812 192 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 OR2F1Q13607 317 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 PHLDA2Q53GA4 152 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 RNLSQ5VYX0 342 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 PPP1R3BQ86XI6 285 aa13.92□□□□□ -0.18
RXRA-203ENST00000484822 GLIPR2Q9H4G4 154 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms