RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 TMEM54Q969K7 222 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 MED8Q96G25 268 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 C9orf72Q96LT7 481 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 CSPG4P5Q96PW8 444 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 ATOH8Q96SQ7 321 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 NICN1Q9BSH3 213 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 DEFB126Q9BYW3 111 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 POLR2J2Q9GZM3 115 aaKnown RBP3.33□□□□□ -1.88
VPS13A-211ENST00000484581 POLR2J3Q9H1A7 115 aaKnown RBP3.33□□□□□ -1.88
VPS13A-211ENST00000484581 SRMSQ9H3Y6 488 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 RETNQ9HD89 108 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 DYRK4Q9NR20 520 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 XCL2Q9UBD3 114 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 CLCF1Q9UBD9 225 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 ABCD2Q9UBJ2 740 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 CSAG2Q9Y5P2 127 aa3.33□□□□□ -1.88
VPS13A-211ENST00000484581 BZW2Q9Y6E2 419 aaKnown RBP3.33□□□□□ -1.88
VPS13A-211ENST00000484581 A0A0B4J2A0 478 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 LOC100653049A0A140TA62 436 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 ZNF726A6NNF4 738 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 LYRM9A8MSI8 78 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 ZNF99A8MXY4 864 aaPredicted RBP3.32□□□□□ -1.88
VPS13A-211ENST00000484581 ZNF879B4DU55 563 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 H7C0C1 242 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 NVLO15381 856 aaKnown RBP3.32□□□□□ -1.88
VPS13A-211ENST00000484581 CLDN11O75508 207 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 KRT34O76011 436 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 SCELO95171 688 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 CD160O95971 181 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 PAHP00439 452 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 GIG44P09565 113 aaPredicted RBP3.32□□□□□ -1.88
VPS13A-211ENST00000484581 CT45A6P0DMU7 189 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 CT45A5P0DMU8 189 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 CT45A7P0DMV0 189 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 CTRB1P17538 263 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 FMO3P31513 532 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 TAS2R19P59542 299 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 ARFRP1Q13795 201 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 KIAA0040Q15053 153 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 CT45A1Q5HYN5 189 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 CTRB2Q6GPI1 263 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 CNIH2Q6PI25 160 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 SCARA5Q6ZMJ2 495 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 MYPOPQ86VE0 399 aaPredicted RBP3.32□□□□□ -1.88
VPS13A-211ENST00000484581 FAM58AQ8N1B3 248 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 PRELID2Q8N945 189 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 GATSQ8NAP1 163 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 OR13C9Q8NGT0 318 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 OR10R2Q8NGX6 335 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 CT45A3Q8NHU0 189 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 TYMSOSQ8TAI1 123 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 LKAAEAR1Q8TD35 194 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 C7orf33Q8WU49 177 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 FAM122AQ96E09 287 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 PIK3IP1Q96FE7 263 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 DEFB127Q9H1M4 99 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 PIGUQ9H490 435 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 SLC25A22Q9H936 323 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 ZC4H2Q9NQZ6 224 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 Q9UF83 564 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 SHPKQ9UHJ6 478 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 MOKQ9UQ07 419 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 MSH6P52701 1360 aa3.32□□□□□ -1.88
VPS13A-211ENST00000484581 NEURL4Q96JN8 1562 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 TMEM94Q12767 1356 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 PIK3R4Q99570 1358 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 TRAV6A0A075B6T7 132 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 IGKV3D-20A0A0C4DH25 116 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 ZBTB5O15062 677 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 POLR1CO15160 346 aaPredicted RBP3.31□□□□□ -1.88
VPS13A-211ENST00000484581 TIMP1P01033 207 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 HSPB1P04792 205 aaKnown RBP3.31□□□□□ -1.88
VPS13A-211ENST00000484581 P0C879 139 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 PSMB1P20618 241 aaKnown RBP3.31□□□□□ -1.88
VPS13A-211ENST00000484581 OR1E1P30953 314 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 SERPINB5P36952 375 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 RORCP51449 518 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 DIO3P55073 304 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 STXBP1P61764 594 aaKnown RBP3.31□□□□□ -1.88
VPS13A-211ENST00000484581 SP4Q02446 784 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 SLC25A11Q02978 314 aaKnown RBP3.31□□□□□ -1.88
VPS13A-211ENST00000484581 ZNF829Q3KNS6 432 aaPredicted RBP3.31□□□□□ -1.88
VPS13A-211ENST00000484581 TCTEX1D4Q5JR98 221 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 CASC10Q5T4H9 136 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 GPR107Q5VW38 600 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 SLC25A25Q6KCM7 469 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 RFLNAQ6ZTI6 216 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 ZADH2Q8N4Q0 377 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 HSD17B11Q8NBQ5 300 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 ZNF740Q8NDX6 193 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 TMEM104Q8NE00 496 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 CD300LFQ8TDQ1 290 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 PIH1D2Q8WWB5 315 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 ECHDC3Q96DC8 303 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 FCRL1Q96LA6 429 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 SH3GL3Q99963 347 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 TMEM175Q9BSA9 504 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 OSBPL10Q9BXB5 764 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 GAL3ST2Q9H3Q3 398 aa3.31□□□□□ -1.88
VPS13A-211ENST00000484581 AGPAT3Q9NRZ7 376 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms