RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CCL2P13500 99 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 RPL27P61353 136 aaKnown RBP10.62□□□□□ -0.71
MSH5-216ENST00000484309 LCN6P62502 163 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 ERVK-25P63136 954 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 SEC23BQ15437 767 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 C16orf89Q6UX73 402 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 DNM1P46Q6ZS02 220 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 RRM2BQ7LG56 351 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 SLC16A14Q7RTX9 510 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 HDDC2Q7Z4H3 204 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 ZNF584Q8IVC4 421 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 CDK20Q8IZL9 346 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 SVOPLQ8N434 492 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 NUP37Q8NFH4 326 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 C7orf34Q96L11 122 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 NSMCE2Q96MF7 247 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 SORCS2Q96PQ0 1159 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 KCNK17Q96T54 332 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 SEPHS2Q99611 448 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 REG4Q9BYZ8 158 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 OR51B6Q9H340 312 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 GORASP2Q9H8Y8 452 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 CD300AQ9UGN4 299 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 ADAM18Q9Y3Q7 739 aa10.62□□□□□ -0.71
MSH5-216ENST00000484309 SONP18583 2426 aaKnown RBP10.62□□□□□ -0.71
MSH5-216ENST00000484309 NIPBLQ6KC79 2804 aaeCLIP10.62□□□□□ -0.71
MSH5-216ENST00000484309 ABCA2Q9BZC7 2435 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 SH3PXD2BA1X283 911 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 B2RBV5 119 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 B9A039 149 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 FAM107AO95990 144 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 IGHMP01871 453 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 BMP4P12644 408 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 ZNF26P17031 533 aaPredicted RBP10.61□□□□□ -0.71
MSH5-216ENST00000484309 RHCEP18577 417 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 NPR2P20594 1047 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 RPL4P36578 427 aaKnown RBP10.61□□□□□ -0.71
MSH5-216ENST00000484309 SLC9A3P48764 834 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 SPIBQ01892 262 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 SGCAQ16586 387 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 FXNQ16595 210 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 MSMPQ1L6U9 139 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 C10orf128Q5T292 105 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 GKAP1Q5VSY0 366 aaPredicted RBP10.61□□□□□ -0.71
MSH5-216ENST00000484309 TMEM53Q6P2H8 277 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 CLEC2AQ6UVW9 174 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 CYP2R1Q6VVX0 501 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 RNF113BQ8IZP6 322 aaKnown RBP10.61□□□□□ -0.71
MSH5-216ENST00000484309 CCDC197Q8NCU1 140 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 NMD3Q96D46 503 aaKnown RBP10.61□□□□□ -0.71
MSH5-216ENST00000484309 PYURFQ96I23 114 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 RHNO1Q9BSD3 238 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 ANKRD19PQ9H560 264 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 STX18Q9P2W9 335 aaKnown RBP10.61□□□□□ -0.71
MSH5-216ENST00000484309 IL20RAQ9UHF4 553 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 FZR1Q9UM11 496 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 UGT2A1Q9Y4X1 527 aa10.61□□□□□ -0.71
MSH5-216ENST00000484309 HIVEP2P31629 2446 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 A0A1W2PPL8 197 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 A0A1W2PRQ8 180 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 HTR3EA5X5Y0 456 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 NPIPB13A6NJU9 1138 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 FAM171A2A8MVW0 826 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 CENPBD1B2RD01 187 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 NPIPB4C9JG80 1138 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 PDE5AO76074 875 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 SEMG1P04279 462 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 FAM157BP0CG42 384 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 ZNF35P13682 527 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 HOXB4P17483 251 aaPredicted RBP10.6□□□□□ -0.71
MSH5-216ENST00000484309 ATP6V1B2P21281 511 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 NR4A1P22736 598 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 PCSK6P29122 969 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 EFNA4P52798 201 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 GALK2Q01415 458 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 KRTAP1-1Q07627 177 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 DGCR6Q14129 220 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 KRT72Q14CN4 511 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 TAF11Q15544 211 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 EFNB3Q15768 340 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 CARTPTQ16568 116 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 SLC36A2Q495M3 483 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 ZBED5Q49AG3 693 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 IQCCQ4KMZ1 466 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 SLC25A47Q6Q0C1 308 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 RINLQ6ZS11 566 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 TMPRSS11FQ6ZWK6 438 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 ZCCHC24Q8N2G6 241 aaKnown RBP10.6□□□□□ -0.71
MSH5-216ENST00000484309 PAQR4Q8N4S7 273 aaPredicted RBP10.6□□□□□ -0.71
MSH5-216ENST00000484309 SLC30A7Q8NEW0 376 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 IL17RDQ8NFM7 739 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 ZNF519Q8TB69 540 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 NABP1Q96AH0 204 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 POM121Q96HA1 1249 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 NSL1Q96IY1 281 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 RSRC1Q96IZ7 334 aaKnown RBP10.6□□□□□ -0.71
MSH5-216ENST00000484309 Q96M85 177 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 FOXN4Q96NZ1 517 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 SYT3Q9BQG1 590 aa10.6□□□□□ -0.71
MSH5-216ENST00000484309 ALG12Q9BV10 488 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms