RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TXNIPQ9H3M7 391 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 SMURF2Q9HAU4 748 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 CRLF2Q9HC73 371 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 TMEM160Q9NX00 188 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 MED29Q9NX70 200 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 GLTPQ9NZD2 209 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 RHCGQ9UBD6 479 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 FBXL3Q9UKT7 428 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 TMCC3Q9ULS5 477 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 ALPK2Q86TB3 2170 aa8.71□□□□□ -1.02
CPSF4-213ENST00000484112 TCRBV5S2A0A599 114 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 SH3PXD2BA1X283 911 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 A6NIZ1 184 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 MCIDASD6RGH6 385 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 hCG_2039718K7EN88 272 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 M0R1B8 84 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 ACOT8O14734 319 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 PGA4P0DJD7 388 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 PGA3P0DJD8 388 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 RAP2AP10114 183 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 ATP6V1B2P21281 511 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 USF1P22415 310 aaPredicted RBP8.7□□□□□ -1.02
CPSF4-213ENST00000484112 AQP2P41181 271 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 OMPP47874 163 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 ZNF133P52736 654 aaPredicted RBP8.7□□□□□ -1.02
CPSF4-213ENST00000484112 RAP1BP61224 184 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 RAP1AP62834 184 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 LSM11P83369 360 aaKnown RBP eCLIP8.7□□□□□ -1.02
CPSF4-213ENST00000484112 CEACAM16Q2WEN9 425 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 TBRG1Q3YBR2 411 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 ZBED5Q49AG3 693 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 FGD3Q5JSP0 725 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 C11orf71Q6IPW1 123 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 CYP2R1Q6VVX0 501 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 ZDHHC21Q8IVQ6 265 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 DEPDC4Q8N2C3 294 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 WDR31Q8NA23 367 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 IL17RDQ8NFM7 739 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 OR4K5Q8NGD3 323 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 ASB10Q8WXI3 467 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 BCL2L2Q92843 193 aaPredicted RBP8.7□□□□□ -1.02
CPSF4-213ENST00000484112 SLC7A6OSQ96CW6 309 aaPredicted RBP8.7□□□□□ -1.02
CPSF4-213ENST00000484112 TXNDC15Q96J42 360 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 GPX7Q96SL4 187 aaPredicted RBP8.7□□□□□ -1.02
CPSF4-213ENST00000484112 ALG12Q9BV10 488 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 MRPL13Q9BYD1 178 aaKnown RBP8.7□□□□□ -1.02
CPSF4-213ENST00000484112 ULBP2Q9BZM5 246 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 YY1AP1Q9H869 796 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 CRNNQ9UBG3 495 aaPredicted RBP8.7□□□□□ -1.02
CPSF4-213ENST00000484112 KCNS2Q9ULS6 477 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 AURKCQ9UQB9 309 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 POFUT2Q9Y2G5 429 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 ATP23Q9Y6H3 246 aa8.7□□□□□ -1.02
CPSF4-213ENST00000484112 LOC100289279A0A1B0GTE1 492 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 M0R3G1 203 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 PIP5K1CO60331 668 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 PTP4A3O75365 173 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 PDE5AO76074 875 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 LY6HO94772 140 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 NDUFB2O95178 105 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 APEHP13798 732 aaKnown RBP8.69□□□□□ -1.02
CPSF4-213ENST00000484112 ACADSP16219 412 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 MAKP20794 623 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 IGFBP5P24593 272 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 FPR3P25089 353 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 CD40P25942 277 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 RRM2P31350 389 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 ARR3P36575 388 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 LIMS1P48059 325 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 FOXG1P55316 489 aaPredicted RBP8.69□□□□□ -1.02
CPSF4-213ENST00000484112 CLRN1P58418 232 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 RPL27P61353 136 aaKnown RBP8.69□□□□□ -1.02
CPSF4-213ENST00000484112 MS4A2Q01362 244 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 SPIBQ01892 262 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 CAMK2DQ13557 499 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 GGTLC2Q14390 218 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 CARTPTQ16568 116 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 FAM120AOSQ5T036 256 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 THEM4Q5T1C6 240 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 C10orf128Q5T292 105 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 ARMC4Q5T2S8 1044 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 RPL13AP3Q6NVV1 102 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 B3GLCTQ6Y288 498 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 LINGO2Q7L985 606 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 LRRC75AQ8NAA5 344 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 NOXO1Q8NFA2 376 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 C10orf105Q8TEF2 133 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 FOXB1Q99853 325 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 EMC6Q9BV81 110 aa8.69□□□□□ -1.02
CPSF4-213ENST00000484112 CADP27708 2225 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 TRBV4-1A0A0J9YWV2 114 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 GSC2O15499 205 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 DHHO43323 396 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 SERPINI2O75830 405 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 UBL3O95164 117 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 FARS2O95363 451 aaKnown RBP8.68□□□□□ -1.02
CPSF4-213ENST00000484112 IGKV3-15P01624 115 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 IGLV1-44P01699 117 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 F13BP05160 661 aa8.68□□□□□ -1.02
CPSF4-213ENST00000484112 CD14P08571 375 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms