RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 OR2T7P0C7T2 308 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 LIMS3P0CW19 117 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 LIMS4P0CW20 117 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 PRF1P14222 555 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 FKBP2P26885 142 aaKnown RBP6.2□□□□□ -1.42
BRCA1-216ENST00000484087 GABRA5P31644 462 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 S100A5P33763 92 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 AQP2P41181 271 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 GAS1P54826 345 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 ACTA2P62736 377 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 ACTG2P63267 376 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 BDH1Q02338 343 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 EGR4Q05215 589 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 RPL18Q07020 188 aaKnown RBP6.2□□□□□ -1.42
BRCA1-216ENST00000484087 ACSM1Q08AH1 577 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 TPBGQ13641 420 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 SNTB1Q13884 538 aaKnown RBP6.2□□□□□ -1.42
BRCA1-216ENST00000484087 GALEQ14376 348 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF846Q147U1 533 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 TOMM34Q15785 309 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-216ENST00000484087 SSX1Q16384 188 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF829Q3KNS6 432 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF404Q494X3 552 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 OR2G6Q5TZ20 316 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 C1orf140Q5VVS0 124 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 LIPKQ5VXJ0 399 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 RTL6Q6ICC9 239 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 LEG1Q6P5S2 330 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 PAQR6Q6TCH4 344 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF322Q6U7Q0 402 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-216ENST00000484087 SLC22A16Q86VW1 577 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 PHC2Q8IXK0 858 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 WDSUB1Q8N9V3 476 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 CYB561A3Q8NBI2 242 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 OR5M1Q8NGP8 315 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 OR2T27Q8NH04 317 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 OR5J2Q8NH18 312 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 MCFD2Q8NI22 146 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 SMPDL3BQ92485 455 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 RPL3LQ92901 407 aaKnown RBP6.2□□□□□ -1.42
BRCA1-216ENST00000484087 BORCS5Q969J3 196 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 TAAR8Q969N4 342 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 SLC25A36Q96CQ1 311 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 C1GALT1C1Q96EU7 318 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 DTNBP1Q96EV8 351 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 MRGPRX4Q96LA9 322 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 SGCZQ96LD1 299 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 MOGAT1Q96PD6 335 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 DMRTA2Q96SC8 542 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 CNN2Q99439 309 aaKnown RBP6.2□□□□□ -1.42
BRCA1-216ENST00000484087 NPAS1Q99742 590 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 COQ7Q99807 217 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 MMP27Q9H306 513 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 MED20Q9H944 212 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 SIAEQ9HAT2 523 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 ZFP64Q9NPA5 681 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 TRIM36Q9NQ86 728 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 ERVK13-1Q9NX77 482 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 CCDC59Q9P031 241 aaKnown RBP6.2□□□□□ -1.42
BRCA1-216ENST00000484087 MED11Q9P086 117 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 BOKQ9UMX3 212 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-216ENST00000484087 MOKQ9UQ07 419 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 RPH3AQ9Y2J0 694 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-216ENST00000484087 NOX1Q9Y5S8 564 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 A3GALT2U3KPV4 340 aa6.2□□□□□ -1.42
BRCA1-216ENST00000484087 TACC2O95359 2948 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 A0A087WZY1 265 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 IGLV3-32A0A0A0MS00 114 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 TRGV5A0A0B4J1U4 118 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 TEX13CA0A0J9YWL9 993 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 A0A1W2PRG6 482 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 TMEM72A0PK05 275 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 CLDN25C9JDP6 229 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 J3QRE1 110 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 PRRG2O14669 202 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 GLCEO94923 617 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 TXNDC12O95881 172 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 IGHG3P01860 377 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 BGLAPP02818 100 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 HLA-DPB1P04440 258 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 ADRA2AP08913 450 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 MRPL3P09001 348 aaKnown RBP6.19□□□□□ -1.42
BRCA1-216ENST00000484087 TFPIP10646 304 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 PRKCAP17252 672 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 SLC2A5P22732 501 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 AHCYP23526 432 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 UQCRC1P31930 480 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 EIF1P41567 113 aaKnown RBP6.19□□□□□ -1.42
BRCA1-216ENST00000484087 CENPAP49450 140 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 STARP49675 285 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 AGFG1P52594 562 aaKnown RBP6.19□□□□□ -1.42
BRCA1-216ENST00000484087 SLC25A1P53007 311 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 DLX5P56178 289 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 RPS3AP61247 264 aaKnown RBP6.19□□□□□ -1.42
BRCA1-216ENST00000484087 HSF2Q03933 536 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 RUNX1T1Q06455 604 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 LTBQ06643 244 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 GPR50Q13585 617 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 KRR1Q13601 381 aaKnown RBP6.19□□□□□ -1.42
BRCA1-216ENST00000484087 FHL1Q13642 323 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms