RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 HSPB2A8KAH6 182 aa23.45■■□□□ 1.35
SHOX2-204ENST00000483851 OGG1O15527 345 aa23.45■■□□□ 1.35
SHOX2-204ENST00000483851 PTTG1O95997 202 aa23.45■■□□□ 1.35
SHOX2-204ENST00000483851 TACSTD2P09758 323 aa23.45■■□□□ 1.35
SHOX2-204ENST00000483851 CTLA4P16410 223 aa23.45■■□□□ 1.35
SHOX2-204ENST00000483851 TGM4P49221 684 aa23.45■■□□□ 1.35
SHOX2-204ENST00000483851 RUNX1T1Q06455 604 aa23.45■■□□□ 1.35
SHOX2-204ENST00000483851 POU4F3Q15319 338 aa23.45■■□□□ 1.35
SHOX2-204ENST00000483851 HSPB2Q16082 182 aa23.45■■□□□ 1.35
SHOX2-204ENST00000483851 DMKNQ6E0U4 476 aaPredicted RBP23.45■■□□□ 1.35
SHOX2-204ENST00000483851 LINC00696Q6ZRV3 163 aa23.45■■□□□ 1.35
SHOX2-204ENST00000483851 ADAD1Q96M93 576 aaKnown RBP23.45■■□□□ 1.35
SHOX2-204ENST00000483851 MFRPQ9BY79 579 aa23.45■■□□□ 1.35
SHOX2-204ENST00000483851 MRPL13Q9BYD1 178 aaKnown RBP23.45■■□□□ 1.35
SHOX2-204ENST00000483851 CNOT1A5YKK6 2376 aaKnown RBP23.45■■□□□ 1.34
SHOX2-204ENST00000483851 CFAP54Q96N23 3096 aa23.45■■□□□ 1.34
SHOX2-204ENST00000483851 TRAF3IP2O43734 574 aaPredicted RBP23.45■■□□□ 1.34
SHOX2-204ENST00000483851 RFPL3SP0C7P2 107 aa23.45■■□□□ 1.34
SHOX2-204ENST00000483851 ZNF43P17038 809 aa23.45■■□□□ 1.34
SHOX2-204ENST00000483851 AGFG1P52594 562 aaKnown RBP23.45■■□□□ 1.34
SHOX2-204ENST00000483851 EGR3Q06889 387 aa23.45■■□□□ 1.34
SHOX2-204ENST00000483851 MFAP5Q13361 173 aa23.45■■□□□ 1.34
SHOX2-204ENST00000483851 RPL22L1Q6P5R6 122 aaKnown RBP23.45■■□□□ 1.34
SHOX2-204ENST00000483851 LYPD4Q6UWN0 246 aa23.45■■□□□ 1.34
SHOX2-204ENST00000483851 MS4A15Q8N5U1 240 aa23.45■■□□□ 1.34
SHOX2-204ENST00000483851 RFLNBQ8N5W9 214 aa23.45■■□□□ 1.34
SHOX2-204ENST00000483851 MDS2Q8NDY4 140 aa23.45■■□□□ 1.34
SHOX2-204ENST00000483851 OR6X1Q8NH79 312 aa23.45■■□□□ 1.34
SHOX2-204ENST00000483851 PELI1Q96FA3 418 aa23.45■■□□□ 1.34
SHOX2-204ENST00000483851 TXNDC15Q96J42 360 aa23.45■■□□□ 1.34
SHOX2-204ENST00000483851 KCNN2Q9H2S1 579 aa23.45■■□□□ 1.34
SHOX2-204ENST00000483851 RERGLQ9H628 205 aa23.45■■□□□ 1.34
SHOX2-204ENST00000483851 MED29Q9NX70 200 aa23.45■■□□□ 1.34
SHOX2-204ENST00000483851 ZFHX2Q9C0A1 2572 aaPredicted RBP23.44■■□□□ 1.34
SHOX2-204ENST00000483851 ALOX5APP20292 161 aa23.44■■□□□ 1.34
SHOX2-204ENST00000483851 GDF1P27539 372 aa23.44■■□□□ 1.34
SHOX2-204ENST00000483851 SDC2P34741 201 aa23.44■■□□□ 1.34
SHOX2-204ENST00000483851 BIDP55957 195 aa23.44■■□□□ 1.34
SHOX2-204ENST00000483851 SIRPAP78324 504 aa23.44■■□□□ 1.34
SHOX2-204ENST00000483851 TP53I3Q53FA7 332 aa23.44■■□□□ 1.34
SHOX2-204ENST00000483851 YRDCQ86U90 279 aaKnown RBP23.44■■□□□ 1.34
SHOX2-204ENST00000483851 VASH2Q86V25 355 aa23.44■■□□□ 1.34
SHOX2-204ENST00000483851 POC5Q8NA72 575 aa23.44■■□□□ 1.34
SHOX2-204ENST00000483851 SYT14Q8NB59 555 aa23.44■■□□□ 1.34
SHOX2-204ENST00000483851 SLC25A44Q96H78 314 aaPredicted RBP23.44■■□□□ 1.34
SHOX2-204ENST00000483851 CEP19Q96LK0 163 aa23.44■■□□□ 1.34
SHOX2-204ENST00000483851 RBP7Q96R05 134 aa23.44■■□□□ 1.34
SHOX2-204ENST00000483851 LAMP5Q9UJQ1 280 aa23.44■■□□□ 1.34
SHOX2-204ENST00000483851 SIRT4Q9Y6E7 314 aaPredicted RBP23.44■■□□□ 1.34
SHOX2-204ENST00000483851 CUL9Q8IWT3 2517 aa23.44■■□□□ 1.34
SHOX2-204ENST00000483851 PINLYPA6NC86 204 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 HPNP05981 417 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 PTGS2P35354 604 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 RAC3P60763 192 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 THEM4Q5T1C6 240 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 ESPNLQ6ZVH7 1005 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 LAX1Q8IWV1 398 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 OR6N2Q8NGY6 317 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 OTOSQ8NHW6 89 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 ASB17Q8WXJ9 295 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 HAS2Q92819 552 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 SFXN2Q96NB2 322 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 TMED9Q9BVK6 235 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 MIXL1Q9H2W2 232 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 TPK1Q9H3S4 243 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 ST6GALNAC2Q9UJ37 374 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 TVP23AA6NH52 213 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 E9PI62 339 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 KHDRBS3O75525 346 aaKnown RBP23.43■■□□□ 1.34
SHOX2-204ENST00000483851 F10P00742 488 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 SP1P08047 785 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 NR2C1P13056 603 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 MXD1Q05195 221 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 ATP1A1-AS1Q5TC04 95 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 SLC25A25Q6KCM7 469 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 SULF2Q8IWU5 870 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 DCLRE1CQ96SD1 692 aaKnown RBP23.43■■□□□ 1.34
SHOX2-204ENST00000483851 ZNF703Q9H7S9 590 aaPredicted RBP23.43■■□□□ 1.34
SHOX2-204ENST00000483851 KLHL9Q9P2J3 617 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 GNG8Q9UK08 70 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 CMAHPQ9Y471 501 aa23.43■■□□□ 1.34
SHOX2-204ENST00000483851 MED13Q9UHV7 2174 aa23.42■■□□□ 1.34
SHOX2-204ENST00000483851 A0A0J9YW62 118 aa23.42■■□□□ 1.34
SHOX2-204ENST00000483851 GABRPO00591 440 aa23.42■■□□□ 1.34
SHOX2-204ENST00000483851 NME2P1O60361 137 aa23.42■■□□□ 1.34
SHOX2-204ENST00000483851 RGS9O75916 674 aaPredicted RBP23.42■■□□□ 1.34
SHOX2-204ENST00000483851 IGHG1P01857 330 aa23.42■■□□□ 1.34
SHOX2-204ENST00000483851 HRGP04196 525 aa23.42■■□□□ 1.34
SHOX2-204ENST00000483851 NME2P22392 152 aa23.42■■□□□ 1.34
SHOX2-204ENST00000483851 HNRNPA0Q13151 305 aaKnown RBP23.42■■□□□ 1.34
SHOX2-204ENST00000483851 CDK5R1Q15078 307 aa23.42■■□□□ 1.34
SHOX2-204ENST00000483851 HYAL4Q2M3T9 481 aa23.42■■□□□ 1.34
SHOX2-204ENST00000483851 FAM220AQ7Z4H9 259 aa23.42■■□□□ 1.34
SHOX2-204ENST00000483851 ZNF454Q8N9F8 522 aa23.42■■□□□ 1.34
SHOX2-204ENST00000483851 ITPKCQ96DU7 683 aa23.42■■□□□ 1.34
SHOX2-204ENST00000483851 SMIM19Q96E16 107 aa23.42■■□□□ 1.34
SHOX2-204ENST00000483851 CDV3Q9UKY7 258 aaKnown RBP23.42■■□□□ 1.34
SHOX2-204ENST00000483851 ZNF814B7Z6K7 855 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 KLRC4-KLRK1H3BQV0 150 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 NKX2-8O15522 239 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms