RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 OR5B2Q96R09 309 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 AMELYQ99218 206 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 MRPL13Q9BYD1 178 aaKnown RBP11.85□□□□□ -0.51
CPNE1-225ENST00000483495 TMEM185BQ9H7F4 350 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 PPP1R3EQ9H7J1 279 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 SACM1LQ9NTJ5 587 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 MED29Q9NX70 200 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 SLCO1C1Q9NYB5 712 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 IKZF2Q9UKS7 526 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 COA3Q9Y2R0 106 aaPredicted RBP11.85□□□□□ -0.51
CPNE1-225ENST00000483495 RALGAPA1Q6GYQ0 2036 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 A0A1W2PNR3 127 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 OR4C45A6NMZ5 311 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 NOTOA8MTQ0 251 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 PIN1P1O15428 100 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 ZIC3O60481 467 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 CBR3O75828 277 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 RPP14O95059 124 aaKnown RBP11.85□□□□□ -0.51
CPNE1-225ENST00000483495 IL7P13232 177 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 ZNF17P17021 662 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 OR2B6P58173 313 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 SPEM2Q0P670 501 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 SLC17A1Q14916 467 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 TMEM176BQ3YBM2 270 aaPredicted RBP11.85□□□□□ -0.51
CPNE1-225ENST00000483495 HSD17B12Q53GQ0 312 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 TEX30Q5JUR7 227 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 HES3Q5TGS1 186 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 DHRS13Q6UX07 377 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 ZNF679Q8IYX0 411 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 OR8H2Q8N162 312 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 SLC26A10Q8NG04 563 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 OR2G2Q8NGZ5 317 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 GNRHR2Q96P88 292 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 B3GNT4Q9C0J1 378 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 TBC1D24Q9ULP9 559 aa11.85□□□□□ -0.51
CPNE1-225ENST00000483495 PCSK5Q92824 1860 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 ARPC4-TTLL3A0A0A6YYG9 625 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 TRBV5-5A0A0J9YX44 114 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 AQP7P3A6NL99 342 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 TMEM212A6NML5 194 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 TRAF3IP2O43734 574 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-225ENST00000483495 KHDRBS3O75525 346 aaKnown RBP11.84□□□□□ -0.51
CPNE1-225ENST00000483495 PMS2P2O95744 297 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 HRGP04196 525 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 TCEA1P23193 301 aaKnown RBP11.84□□□□□ -0.51
CPNE1-225ENST00000483495 APEX1P27695 318 aaKnown RBP11.84□□□□□ -0.51
CPNE1-225ENST00000483495 BIDP55957 195 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 ADAM8P78325 824 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 SLC35A1P78382 337 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 MEP1BQ16820 701 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 ACER2Q5QJU3 275 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 AGAP7PQ5VUJ5 663 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 TMPPEQ6ZT21 453 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 MDGA2Q7Z553 956 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 GLRX5Q86SX6 157 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 PIP4P1Q86T03 277 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 UEVLDQ8IX04 471 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 OR5AK2Q8NH90 309 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 NSMAFQ92636 917 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 FOXN4Q96NZ1 517 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 OXGR1Q96P68 337 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 DCBLD2Q96PD2 775 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 DERL3Q96Q80 235 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.84□□□□□ -0.51
CPNE1-225ENST00000483495 NOX4Q9NPH5 578 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 TIGARQ9NQ88 270 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 RHBDL2Q9NX52 303 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 KLHL9Q9P2J3 617 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 ING1Q9UK53 422 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-225ENST00000483495 RASD1Q9Y272 281 aa11.84□□□□□ -0.51
CPNE1-225ENST00000483495 IGKV1D-43A0A0B4J1Z2 117 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 TMCC2O75069 709 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 TMEM127O75204 238 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 ZNF432O94892 652 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 OPN1LWP04000 364 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 HNRNPCP07910 306 aaKnown RBP eCLIP11.83□□□□□ -0.521e-10■□□□□ 10.7
CPNE1-225ENST00000483495 SPARCP09486 303 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 CSF3P09919 207 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 EPXP11678 715 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 SRMP19623 302 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 AZGP1P25311 298 aaKnown RBP11.83□□□□□ -0.52
CPNE1-225ENST00000483495 SFTPDP35247 375 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 DLSTP36957 453 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 CCR9P51686 369 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 H3F3AP84243 136 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 FMODQ06828 376 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 RASGEF1BQ0VAM2 473 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 SLC25A35Q3KQZ1 300 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 Q499Y3 187 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 B3GNTL1Q67FW5 361 aaPredicted RBP11.83□□□□□ -0.52
CPNE1-225ENST00000483495 KCTD18Q6PI47 426 aaPredicted RBP11.83□□□□□ -0.52
CPNE1-225ENST00000483495 LRRC69Q6ZNQ3 347 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 GDPD3Q7L5L3 318 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 HDDC2Q7Z4H3 204 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 LRRC28Q86X40 367 aaPredicted RBP11.83□□□□□ -0.52
CPNE1-225ENST00000483495 RNF128Q8TEB7 428 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 PSMF1Q92530 271 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 C4orf45Q96LM5 186 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 ELOVL3Q9HB03 270 aa11.83□□□□□ -0.52
CPNE1-225ENST00000483495 CYSLTR2Q9NS75 346 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms