RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 CRLF2Q9HC73 371 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 THUMPD1Q9NXG2 353 aaKnown RBP5.06□□□□□ -1.6
CSDE1-207ENST00000483407 LGALS13Q9UHV8 139 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 USP22Q9UPT9 525 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 IFT52Q9Y366 437 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 GRIP1Q9Y3R0 1128 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 CMAHPQ9Y471 501 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 NOX1Q9Y5S8 564 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 PKD1L1Q8TDX9 2849 aa5.06□□□□□ -1.6
CSDE1-207ENST00000483407 NOTCH1P46531 2555 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 IGHV2OR16-5A0A0B4J2B6 119 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 ZNF99A8MXY4 864 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-207ENST00000483407 M0R233 179 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 AIM2O14862 343 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 BIRC5O15392 142 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 SPRY1O43609 319 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-207ENST00000483407 ITM2AO43736 263 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 SYNGR3O43761 229 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 OR2T1O43869 369 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 TYROBPO43914 113 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 NPIPB7O75200 414 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 ANP32DO95626 131 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 TFP02787 698 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 BCHEP06276 602 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 ADRA2AP08913 450 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 PNMTP11086 282 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 BTF3P20290 206 aaKnown RBP5.05□□□□□ -1.6
CSDE1-207ENST00000483407 ACHEP22303 614 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 GCSHP23434 173 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 CFPP27918 469 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 IL2RGP31785 369 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 ACAA2P42765 397 aaKnown RBP5.05□□□□□ -1.6
CSDE1-207ENST00000483407 CDKN2CP42773 168 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 CRATP43155 626 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 GPR6P46095 362 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-207ENST00000483407 RPS5P46782 204 aaKnown RBP5.05□□□□□ -1.6
CSDE1-207ENST00000483407 SLC1A6P48664 564 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 EVX1P49640 407 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 NME5P56597 212 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 DSTNP60981 165 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 UFM1P61960 85 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 RPS23P62266 143 aaKnown RBP5.05□□□□□ -1.6
CSDE1-207ENST00000483407 ACTG1P63261 375 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 ARF1P84077 181 aaKnown RBP5.05□□□□□ -1.6
CSDE1-207ENST00000483407 POU3F1Q03052 451 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-207ENST00000483407 FOXL1Q12952 345 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 TRIP10Q15642 601 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 CEACAM16Q2WEN9 425 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 TRMT5Q32P41 509 aaKnown RBP5.05□□□□□ -1.6
CSDE1-207ENST00000483407 SLC9B1Q4ZJI4 515 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 ATG16L1Q676U5 607 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 KRT80Q6KB66 452 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 C5orf46Q6UWT4 87 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 ZNF836Q6ZNA1 936 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 LINGO2Q7L985 606 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 SNX32Q86XE0 403 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 CDK20Q8IZL9 346 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 KDM8Q8N371 416 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-207ENST00000483407 MGARPQ8TDB4 240 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 ZNF418Q8TF45 676 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-207ENST00000483407 PKNOX2Q96KN3 472 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 OXGR1Q96P68 337 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 PLA2G12AQ9BZM1 189 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 MS4A7Q9GZW8 240 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-207ENST00000483407 TPK1Q9H3S4 243 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 MEAF6Q9HAF1 191 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 NOX3Q9HBY0 568 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 B3GAT2Q9NPZ5 323 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 MRPS18AQ9NVS2 196 aaKnown RBP5.05□□□□□ -1.6
CSDE1-207ENST00000483407 AIG1Q9NVV5 245 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 RPS6KB2Q9UBS0 482 aa5.05□□□□□ -1.6
CSDE1-207ENST00000483407 ZNF443Q9Y2A4 671 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-207ENST00000483407 DSPPQ9NZW4 1301 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 A0A0G2JPF8 293 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 TMEM129A0AVI4 362 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 HNRNPCL2B2RXH8 293 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 HNRNPCL3B7ZW38 293 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 FTCDNL1E5RQL4 147 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 LYNX1G3V0Z9 82 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 TRIM77I1YAP6 450 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 M0R3G1 203 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 TM9SF1O15321 606 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 HNRNPCL1O60812 293 aaKnown RBP5.04□□□□□ -1.6
CSDE1-207ENST00000483407 ZNF432O94892 652 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 INMTO95050 263 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 RAB36O95755 333 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 C1QCP02747 245 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 IL6P05231 212 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 MSMBP08118 114 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 HNRNPCL4P0DMR1 293 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 LYNX1P0DP58 116 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 SAGP10523 405 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-207ENST00000483407 CD79AP11912 226 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 PRG2P13727 222 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 ETFAP13804 333 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 ANPEPP15144 967 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 NQO1P15559 274 aaKnown RBP5.04□□□□□ -1.6
CSDE1-207ENST00000483407 CREB1P16220 341 aa5.04□□□□□ -1.6
CSDE1-207ENST00000483407 NR4A1P22736 598 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms