RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 ABCA1O95477 2261 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 LOC390937A0A1W2PQ73 354 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 SH3PXD2BA1X283 911 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 EFCAB9A8MZ26 197 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 FFAR1O14842 300 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 GPRIN2O60269 458 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 CRLF1O75462 422 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 GMNNO75496 209 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 NCK1P16333 377 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 MAKP20794 623 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 USF1P22415 310 aaPredicted RBP13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 SLC9A3P48764 834 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 CTXN1P60606 82 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 RPL27P61353 136 aaKnown RBP13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 LSM11P83369 360 aaKnown RBP eCLIP13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 TMEM249Q2WGJ8 235 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 RRM2BQ7LG56 351 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 ZNF584Q8IVC4 421 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 FNDC8Q8TC99 324 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 HDAC2Q92769 488 aaKnown RBP13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 MRPL24Q96A35 216 aaKnown RBP13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 KCNK17Q96T54 332 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 ALG12Q9BV10 488 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 KCNN2Q9H2S1 579 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 ANKRD19PQ9H560 264 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 SMURF2Q9HAU4 748 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 DYNLRB1Q9NP97 96 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 SPAG4Q9NPE6 437 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 SLC7A8Q9UHI5 535 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 ZNF346Q9UL40 294 aaKnown RBP13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 ENPP4Q9Y6X5 453 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 TLN2Q9Y4G6 2542 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 ZANQ9Y493 2812 aa13.24□□□□□ -0.29
EXOSC3-205ENST00000482614 A0A087WUU8 490 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 SLC22A23A1A5C7 686 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 VWC2LB2RUY7 222 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 PRSS23O95084 383 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 IGHMP01871 453 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 FUT4P22083 530 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 VLDLRP98155 873 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 PLP2Q04941 152 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 CD47Q08722 323 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 CARTPTQ16568 116 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 FXNQ16595 210 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 FAM205BPQ63HN1 556 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 GLYATQ6IB77 296 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 ZNF730Q6ZMV8 503 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 MBOAT2Q6ZWT7 520 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 OAFQ86UD1 273 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 ZNF540Q8NDQ6 660 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 SLC30A7Q8NEW0 376 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 OR1J2Q8NGS2 313 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 RBP7Q96R05 134 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 MRPL37Q9BZE1 423 aaKnown RBP13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 SIAEQ9HAT2 523 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 ADA2Q9NZK5 511 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 EGFL7Q9UHF1 273 aa13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 CHD3Q12873 2000 aaKnown RBP13.23□□□□□ -0.29
EXOSC3-205ENST00000482614 IQCMA0A1B0GVH7 501 aa13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 A8MV72 311 aaPredicted RBP13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 SYNGR3O43761 229 aa13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 SLC2A10O95528 541 aa13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 ADRA2AP08913 450 aa13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 NR4A2P43354 598 aa13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 MRPS34P82930 218 aaKnown RBP13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 TOP3AQ13472 1001 aaPredicted RBP13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 THEM4Q5T1C6 240 aa13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 CYB5R2Q6BCY4 276 aa13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 SLC25A47Q6Q0C1 308 aa13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 TMPRSS11FQ6ZWK6 438 aa13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 LRRC18Q8N456 261 aa13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 LRRC75AQ8NAA5 344 aa13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 RBM15BQ8NDT2 890 aaKnown RBP13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 OR51A7Q8NH64 312 aa13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 NMD3Q96D46 503 aaKnown RBP13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 FOXN4Q96NZ1 517 aa13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 LRMDAQ9H2I8 198 aa13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 MS4A5Q9H3V2 200 aa13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 NMNAT1Q9HAN9 279 aaPredicted RBP13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 CDH20Q9HBT6 801 aa13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 SAMD4AQ9UPU9 718 aaKnown RBP13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 FAM32AQ9Y421 112 aaKnown RBP13.22□□□□□ -0.29
EXOSC3-205ENST00000482614 TRAV27A0A087WT01 109 aa13.21□□□□□ -0.29
EXOSC3-205ENST00000482614 A6NIZ1 184 aa13.21□□□□□ -0.29
EXOSC3-205ENST00000482614 M0R233 179 aa13.21□□□□□ -0.29
EXOSC3-205ENST00000482614 STAMBPO95630 424 aa13.21□□□□□ -0.29
EXOSC3-205ENST00000482614 SNAP29O95721 258 aa13.21□□□□□ -0.29
EXOSC3-205ENST00000482614 MMP7P09237 267 aaPredicted RBP13.21□□□□□ -0.29
EXOSC3-205ENST00000482614 DAOP14920 347 aa13.21□□□□□ -0.29
EXOSC3-205ENST00000482614 RHCEP18577 417 aa13.21□□□□□ -0.29
EXOSC3-205ENST00000482614 GUCA1AP43080 201 aaPredicted RBP13.21□□□□□ -0.29
EXOSC3-205ENST00000482614 RAP1BP61224 184 aa13.21□□□□□ -0.29
EXOSC3-205ENST00000482614 RAP1AP62834 184 aa13.21□□□□□ -0.29
EXOSC3-205ENST00000482614 GNGT1P63211 74 aa13.21□□□□□ -0.29
EXOSC3-205ENST00000482614 HSF2Q03933 536 aa13.21□□□□□ -0.29
EXOSC3-205ENST00000482614 GGTLC2Q14390 218 aa13.21□□□□□ -0.29
EXOSC3-205ENST00000482614 SGCAQ16586 387 aa13.21□□□□□ -0.29
EXOSC3-205ENST00000482614 MSMPQ1L6U9 139 aa13.21□□□□□ -0.29
EXOSC3-205ENST00000482614 TBC1D28Q2M2D7 210 aa13.21□□□□□ -0.29
EXOSC3-205ENST00000482614 C6orf52Q5T4I8 152 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms