RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 ICA1LQ8NDH6 482 aa13.55□□□□□ -0.24
COL16A1-212ENST00000482478 OR51A7Q8NH64 312 aa13.55□□□□□ -0.24
COL16A1-212ENST00000482478 LIPHQ8WWY8 451 aa13.55□□□□□ -0.24
COL16A1-212ENST00000482478 HDAC2Q92769 488 aaKnown RBP13.55□□□□□ -0.24
COL16A1-212ENST00000482478 MRPL24Q96A35 216 aaKnown RBP13.55□□□□□ -0.24
COL16A1-212ENST00000482478 KCNN2Q9H2S1 579 aa13.55□□□□□ -0.24
COL16A1-212ENST00000482478 TXNIPQ9H3M7 391 aa13.55□□□□□ -0.24
COL16A1-212ENST00000482478 TPK1Q9H3S4 243 aa13.55□□□□□ -0.24
COL16A1-212ENST00000482478 CCNB1IP1Q9NPC3 277 aa13.55□□□□□ -0.24
COL16A1-212ENST00000482478 FZR1Q9UM11 496 aa13.55□□□□□ -0.24
COL16A1-212ENST00000482478 SAMD4AQ9UPU9 718 aaKnown RBP13.55□□□□□ -0.24
COL16A1-212ENST00000482478 NPIPB13A6NJU9 1138 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 NPIPB4C9JG80 1138 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 TLX2O43763 284 aaPredicted RBP13.54□□□□□ -0.24
COL16A1-212ENST00000482478 TCN1P20061 433 aaPredicted RBP13.54□□□□□ -0.24
COL16A1-212ENST00000482478 MAKP20794 623 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 RPL4P36578 427 aaKnown RBP13.54□□□□□ -0.24
COL16A1-212ENST00000482478 GYS2P54840 703 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 CTXN1P60606 82 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 PLP2Q04941 152 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 LOXL1Q08397 574 aaPredicted RBP13.54□□□□□ -0.24
COL16A1-212ENST00000482478 TAF11Q15544 211 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 TBC1D28Q2M2D7 210 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 IQCCQ4KMZ1 466 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 C10orf128Q5T292 105 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 ARMC4Q5T2S8 1044 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 C6orf52Q5T4I8 152 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 FAM205BPQ63HN1 556 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 RRM2BQ7LG56 351 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 OAFQ86UD1 273 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 ZNF584Q8IVC4 421 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 FGFBP3Q8TAT2 258 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 ACOT11Q8WXI4 607 aaPredicted RBP13.54□□□□□ -0.24
COL16A1-212ENST00000482478 TSPAN32Q96QS1 320 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 ALG12Q9BV10 488 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 MRPL37Q9BZE1 423 aaKnown RBP13.54□□□□□ -0.24
COL16A1-212ENST00000482478 C1orf198Q9H425 327 aa13.54□□□□□ -0.24
COL16A1-212ENST00000482478 KRCC1Q9NPI7 259 aaPredicted RBP13.54□□□□□ -0.24
COL16A1-212ENST00000482478 FAM32AQ9Y421 112 aaKnown RBP13.54□□□□□ -0.24
COL16A1-212ENST00000482478 A0A096LNT2 108 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 IQCMA0A1B0GVH7 501 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 A0A1W2PPL8 197 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 HTR3EA5X5Y0 456 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 H7C1C5 153 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 NDUFS8O00217 210 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 FFAR1O14842 300 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 IGHMP01871 453 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 SERPINA5P05154 406 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 FAM157BP0CG42 384 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 ZNF35P13682 527 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 FUT4P22083 530 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 USF1P22415 310 aaPredicted RBP13.53□□□□□ -0.24
COL16A1-212ENST00000482478 CDAP32320 146 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 SLC9A3P48764 834 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 RPL27P61353 136 aaKnown RBP13.53□□□□□ -0.24
COL16A1-212ENST00000482478 LCN6P62502 163 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 MXRA7P84157 204 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 HIST3H3Q16695 136 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 NRN1LQ496H8 165 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 MBOAT2Q6ZWT7 520 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 CLDN22Q8N7P3 220 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 FAM156AQ8NDB6 213 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 FAM46AQ96IP4 442 aaKnown RBP13.53□□□□□ -0.24
COL16A1-212ENST00000482478 TNFRSF13CQ96RJ3 184 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 SEPHS2Q99611 448 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 MRPL13Q9BYD1 178 aaKnown RBP13.53□□□□□ -0.24
COL16A1-212ENST00000482478 SMURF2Q9HAU4 748 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 TMEM5Q9Y2B1 443 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 ENPP4Q9Y6X5 453 aa13.53□□□□□ -0.24
COL16A1-212ENST00000482478 ARFGEF3Q5TH69 2177 aa13.52□□□□□ -0.24
COL16A1-212ENST00000482478 LOC390937A0A1W2PQ73 354 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 A6NIZ1 184 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 H1F0P07305 194 aaKnown RBP13.52□□□□□ -0.25
COL16A1-212ENST00000482478 ADRA2AP08913 450 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 CCL2P13500 99 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 DAOP14920 347 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 APLNRP35414 380 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 GLRXP35754 106 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 ALDH3B1P43353 468 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 RAP1BP61224 184 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 RAP1AP62834 184 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 VLDLRP98155 873 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 PRKCDQ05655 676 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 LAPTM4AQ15012 233 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 NKPD1Q17RQ9 610 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 GLYATQ6IB77 296 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 RGS7BPQ6MZT1 257 aaPredicted RBP13.52□□□□□ -0.25
COL16A1-212ENST00000482478 ZCCHC24Q8N2G6 241 aaKnown RBP13.52□□□□□ -0.25
COL16A1-212ENST00000482478 NEU4Q8WWR8 484 aaPredicted RBP13.52□□□□□ -0.25
COL16A1-212ENST00000482478 ZNF75AQ96N20 296 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 ZNF570Q96NI8 536 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 KCNK17Q96T54 332 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 BPESC1Q9GZL8 116 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 LRMDAQ9H2I8 198 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 ANKRD19PQ9H560 264 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 MAGEL2Q9UJ55 1249 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 ZANQ9Y493 2812 aa13.52□□□□□ -0.25
COL16A1-212ENST00000482478 ALPK2Q86TB3 2170 aa13.51□□□□□ -0.25
COL16A1-212ENST00000482478 ANK3Q12955 4377 aaKnown RBP13.51□□□□□ -0.25
COL16A1-212ENST00000482478 A0A087WUU8 490 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms