RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 NPIPB4C9JG80 1138 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 SYNGR3O43761 229 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 ADRA2AP08913 450 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 PATE4P0C8F1 98 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 ZNF35P13682 527 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 DAOP14920 347 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 EVX1P49640 407 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 GZMKP49863 264 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 PSME3P61289 254 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 VLDLRP98155 873 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 LAPTM4AQ15012 233 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 NRMQ8IXM6 262 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 LRRC18Q8N456 261 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 ACOT11Q8WXI4 607 aaPredicted RBP17.18■□□□□ 0.34
MSH5-215ENST00000482280 DOK1Q99704 481 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 MRPL13Q9BYD1 178 aaKnown RBP17.18■□□□□ 0.34
MSH5-215ENST00000482280 TXNIPQ9H3M7 391 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 SMURF2Q9HAU4 748 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 KRCC1Q9NPI7 259 aaPredicted RBP17.18■□□□□ 0.34
MSH5-215ENST00000482280 ZNF224Q9NZL3 707 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 HIF3AQ9Y2N7 669 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 A6NIZ1 184 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 IFNA2P01563 188 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 APEHP13798 732 aaKnown RBP17.17■□□□□ 0.34
MSH5-215ENST00000482280 PRDX6P30041 224 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 APLNRP35414 380 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 RPL4P36578 427 aaKnown RBP17.17■□□□□ 0.34
MSH5-215ENST00000482280 NR4A2P43354 598 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 SLC9A3P48764 834 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 SEC24CP53992 1094 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 CTXN1P60606 82 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 RAP1BP61224 184 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 RAP1AP62834 184 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 HIST3H3Q16695 136 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 CHRFAM7AQ494W8 412 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 TREML1Q86YW5 311 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 OR51A7Q8NH64 312 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 NSMAFQ92636 917 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 FOXN4Q96NZ1 517 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 KCNK17Q96T54 332 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 REV1Q9UBZ9 1251 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 DUSP13Q9UII6 198 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 ZNF346Q9UL40 294 aaKnown RBP17.17■□□□□ 0.34
MSH5-215ENST00000482280 SAMD4AQ9UPU9 718 aaKnown RBP17.17■□□□□ 0.34
MSH5-215ENST00000482280 ZFHX3Q15911 3703 aa17.17■□□□□ 0.34
MSH5-215ENST00000482280 VPS13CQ709C8 3753 aa17.16■□□□□ 0.34
MSH5-215ENST00000482280 J3KTA2 159 aa17.16■□□□□ 0.34
MSH5-215ENST00000482280 RAD52P43351 418 aa17.16■□□□□ 0.34
MSH5-215ENST00000482280 RPL27P61353 136 aaKnown RBP17.16■□□□□ 0.34
MSH5-215ENST00000482280 PRKCDQ05655 676 aa17.16■□□□□ 0.34
MSH5-215ENST00000482280 RUNX1T1Q06455 604 aa17.16■□□□□ 0.34
MSH5-215ENST00000482280 KRT72Q14CN4 511 aa17.16■□□□□ 0.34
MSH5-215ENST00000482280 SGCAQ16586 387 aa17.16■□□□□ 0.34
MSH5-215ENST00000482280 THEM4Q5T1C6 240 aa17.16■□□□□ 0.34
MSH5-215ENST00000482280 ARMC4Q5T2S8 1044 aa17.16■□□□□ 0.34
MSH5-215ENST00000482280 C6orf52Q5T4I8 152 aa17.16■□□□□ 0.34
MSH5-215ENST00000482280 RGS7BPQ6MZT1 257 aaPredicted RBP17.16■□□□□ 0.34
MSH5-215ENST00000482280 UNQ6126/PRO20091Q6UXV3 157 aa17.16■□□□□ 0.34
MSH5-215ENST00000482280 ZNF75AQ96N20 296 aa17.16■□□□□ 0.34
MSH5-215ENST00000482280 SYT3Q9BQG1 590 aa17.16■□□□□ 0.34
MSH5-215ENST00000482280 ALG12Q9BV10 488 aa17.16■□□□□ 0.34
MSH5-215ENST00000482280 MRPL37Q9BZE1 423 aaKnown RBP17.16■□□□□ 0.34
MSH5-215ENST00000482280 SIAEQ9HAT2 523 aa17.16■□□□□ 0.34
MSH5-215ENST00000482280 TMEM5Q9Y2B1 443 aa17.16■□□□□ 0.34
MSH5-215ENST00000482280 SNX13Q9Y5W8 968 aa17.16■□□□□ 0.34
MSH5-215ENST00000482280 XKRYO14609 159 aa17.15■□□□□ 0.34
MSH5-215ENST00000482280 SLC2A10O95528 541 aa17.15■□□□□ 0.34
MSH5-215ENST00000482280 LCKP06239 509 aa17.15■□□□□ 0.34
MSH5-215ENST00000482280 NCK1P16333 377 aa17.15■□□□□ 0.34
MSH5-215ENST00000482280 MRPS34P82930 218 aaKnown RBP17.15■□□□□ 0.34
MSH5-215ENST00000482280 NKPD1Q17RQ9 610 aa17.15■□□□□ 0.34
MSH5-215ENST00000482280 C10orf128Q5T292 105 aa17.15■□□□□ 0.34
MSH5-215ENST00000482280 MBOAT2Q6ZWT7 520 aa17.15■□□□□ 0.34
MSH5-215ENST00000482280 ICA1LQ8NDH6 482 aa17.15■□□□□ 0.34
MSH5-215ENST00000482280 UBASH3BQ8TF42 649 aa17.15■□□□□ 0.34
MSH5-215ENST00000482280 SNX33Q8WV41 574 aa17.15■□□□□ 0.34
MSH5-215ENST00000482280 C11orf40Q8WZ69 217 aa17.15■□□□□ 0.34
MSH5-215ENST00000482280 SEPHS2Q99611 448 aa17.15■□□□□ 0.34
MSH5-215ENST00000482280 TPK1Q9H3S4 243 aa17.15■□□□□ 0.34
MSH5-215ENST00000482280 ANKRD19PQ9H560 264 aa17.15■□□□□ 0.34
MSH5-215ENST00000482280 GMPR2Q9P2T1 348 aaKnown RBP17.15■□□□□ 0.34
MSH5-215ENST00000482280 EIF3KQ9UBQ5 218 aaKnown RBP17.15■□□□□ 0.34
MSH5-215ENST00000482280 GRHPRQ9UBQ7 328 aa17.15■□□□□ 0.34
MSH5-215ENST00000482280 CDC42EP3Q9UKI2 254 aa17.15■□□□□ 0.34
MSH5-215ENST00000482280 ENPP4Q9Y6X5 453 aa17.15■□□□□ 0.34
MSH5-215ENST00000482280 NSD1Q96L73 2696 aaPredicted RBP17.14■□□□□ 0.34
MSH5-215ENST00000482280 TRAV27A0A087WT01 109 aa17.14■□□□□ 0.33
MSH5-215ENST00000482280 SNX3O60493 162 aa17.14■□□□□ 0.33
MSH5-215ENST00000482280 MT-ND5P03915 603 aa17.14■□□□□ 0.33
MSH5-215ENST00000482280 TSPAN19P0C672 248 aa17.14■□□□□ 0.33
MSH5-215ENST00000482280 FAM157BP0CG42 384 aa17.14■□□□□ 0.33
MSH5-215ENST00000482280 CCNOP22674 350 aa17.14■□□□□ 0.33
MSH5-215ENST00000482280 FGD3Q5JSP0 725 aa17.14■□□□□ 0.33
MSH5-215ENST00000482280 GLYATQ6IB77 296 aa17.14■□□□□ 0.33
MSH5-215ENST00000482280 C8orf82Q6P1X6 216 aaPredicted RBP17.14■□□□□ 0.33
MSH5-215ENST00000482280 IGFN1Q86VF2 1251 aa17.14■□□□□ 0.33
MSH5-215ENST00000482280 HIPK1Q86Z02 1210 aa17.14■□□□□ 0.33
MSH5-215ENST00000482280 ALDH16A1Q8IZ83 802 aa17.14■□□□□ 0.33
MSH5-215ENST00000482280 ZCCHC24Q8N2G6 241 aaKnown RBP17.14■□□□□ 0.33
MSH5-215ENST00000482280 FGFBP3Q8TAT2 258 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms