RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 SLC16A9Q7RTY1 509 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 FGD2Q7Z6J4 655 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 ATCAYQ86WG3 371 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 GPR137CQ8N3F9 429 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 ACBD7Q8N6N7 88 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 ZNF454Q8N9F8 522 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 OR6K3Q8NGY3 331 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 CPT1CQ8TCG5 803 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 MCHR2Q969V1 340 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 APH1AQ96BI3 265 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 EMC6Q9BV81 110 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 HCAR1Q9BXC0 346 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 ULBP2Q9BZM5 246 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 SLCO5A1Q9H2Y9 848 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 SRA1Q9HD15 236 aaKnown RBP9.01□□□□□ -0.97
USP39-215ENST00000481409 ASF1BQ9NVP2 202 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 ERGIC3Q9Y282 383 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 CFAP47Q6ZTR5 3102 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 CACNA1GO43497 2377 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 TMEM129A0AVI4 362 aa9□□□□□ -0.97
USP39-215ENST00000481409 J3QRE1 110 aa9□□□□□ -0.97
USP39-215ENST00000481409 ATXN7O15265 892 aaPredicted RBP9□□□□□ -0.97
USP39-215ENST00000481409 DHHO43323 396 aa9□□□□□ -0.97
USP39-215ENST00000481409 TGM6O95932 706 aa9□□□□□ -0.97
USP39-215ENST00000481409 IL18BPO95998 194 aa9□□□□□ -0.97
USP39-215ENST00000481409 QDPRP09417 244 aa9□□□□□ -0.97
USP39-215ENST00000481409 CTLA4P16410 223 aa9□□□□□ -0.97
USP39-215ENST00000481409 PAX7P23759 505 aa9□□□□□ -0.97
USP39-215ENST00000481409 AGTR1P30556 359 aa9□□□□□ -0.97
USP39-215ENST00000481409 TTKP33981 857 aa9□□□□□ -0.97
USP39-215ENST00000481409 SELENOPP49908 381 aa9□□□□□ -0.97
USP39-215ENST00000481409 NUDT6P53370 316 aa9□□□□□ -0.97
USP39-215ENST00000481409 NR1H2P55055 460 aa9□□□□□ -0.97
USP39-215ENST00000481409 SH3BGRP55822 239 aaPredicted RBP9□□□□□ -0.97
USP39-215ENST00000481409 LSM6P62312 80 aaKnown RBP9□□□□□ -0.97
USP39-215ENST00000481409 ACTA2P62736 377 aa9□□□□□ -0.97
USP39-215ENST00000481409 ACTG2P63267 376 aa9□□□□□ -0.97
USP39-215ENST00000481409 RUNX1T1Q06455 604 aa9□□□□□ -0.97
USP39-215ENST00000481409 MRPL28Q13084 256 aaKnown RBP9□□□□□ -0.97
USP39-215ENST00000481409 PCK2Q16822 640 aa9□□□□□ -0.97
USP39-215ENST00000481409 ST3GAL2Q16842 350 aa9□□□□□ -0.97
USP39-215ENST00000481409 ZNF585AQ6P3V2 769 aa9□□□□□ -0.97
USP39-215ENST00000481409 C19orf48Q6RUI8 117 aa9□□□□□ -0.97
USP39-215ENST00000481409 ZNF627Q7L945 461 aa9□□□□□ -0.97
USP39-215ENST00000481409 KCTD20Q7Z5Y7 419 aa9□□□□□ -0.97
USP39-215ENST00000481409 DPPA2Q7Z7J5 298 aa9□□□□□ -0.97
USP39-215ENST00000481409 CD163Q86VB7 1156 aa9□□□□□ -0.97
USP39-215ENST00000481409 TUSC5Q8IXB3 177 aa9□□□□□ -0.97
USP39-215ENST00000481409 TIGD4Q8IY51 512 aa9□□□□□ -0.97
USP39-215ENST00000481409 ZNF100Q8IYN0 542 aa9□□□□□ -0.97
USP39-215ENST00000481409 BBS1Q8NFJ9 593 aa9□□□□□ -0.97
USP39-215ENST00000481409 OR52I1Q8NGK6 324 aa9□□□□□ -0.97
USP39-215ENST00000481409 OR9Q1Q8NGQ5 310 aa9□□□□□ -0.97
USP39-215ENST00000481409 OR6K6Q8NGW6 343 aa9□□□□□ -0.97
USP39-215ENST00000481409 ASB17Q8WXJ9 295 aa9□□□□□ -0.97
USP39-215ENST00000481409 RELTQ969Z4 430 aa9□□□□□ -0.97
USP39-215ENST00000481409 LGALS12Q96DT0 336 aa9□□□□□ -0.97
USP39-215ENST00000481409 BOD1Q96IK1 185 aa9□□□□□ -0.97
USP39-215ENST00000481409 INTS14Q96SY0 518 aa9□□□□□ -0.97
USP39-215ENST00000481409 MND1Q9BWT6 205 aa9□□□□□ -0.97
USP39-215ENST00000481409 MED20Q9H944 212 aa9□□□□□ -0.97
USP39-215ENST00000481409 ADGRL4Q9HBW9 690 aa9□□□□□ -0.97
USP39-215ENST00000481409 LUZP4Q9P127 313 aa9□□□□□ -0.97
USP39-215ENST00000481409 MED12Q93074 2177 aa9□□□□□ -0.97
USP39-215ENST00000481409 CELSR3Q9NYQ7 3312 aa9□□□□□ -0.97
USP39-215ENST00000481409 ZNF670-ZNF695F2Z2N8 137 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 GPR37O15354 613 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 SLC19A2O60779 497 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 SMNDC1O75940 238 aaKnown RBP eCLIP8.99□□□□□ -0.97
USP39-215ENST00000481409 KRT33AO76009 404 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 STSP08842 583 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 CLUP10909 449 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 ZNF823P16415 610 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 JUNBP17275 347 aaPredicted RBP8.99□□□□□ -0.97
USP39-215ENST00000481409 KLK2P20151 261 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 CEACAM8P31997 349 aaPredicted RBP8.99□□□□□ -0.97
USP39-215ENST00000481409 RPL5P46777 297 aaKnown RBP8.99□□□□□ -0.97
USP39-215ENST00000481409 OR3A2P47893 321 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 ENTPD1P49961 510 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 MRPS34P82930 218 aaKnown RBP8.99□□□□□ -0.97
USP39-215ENST00000481409 BDH1Q02338 343 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 GALEQ14376 348 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 IRF3Q14653 427 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 C3AR1Q16581 482 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 FBXW9Q5XUX1 488 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 LRFN4Q6PJG9 635 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 TMPRSS11AQ6ZMR5 421 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 BCDIN3DQ7Z5W3 292 aaKnown RBP8.99□□□□□ -0.97
USP39-215ENST00000481409 SYT9Q86SS6 491 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 CCDC36Q8IYA8 594 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 SPARTQ8N0X7 666 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 SYT14Q8NB59 555 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 SLC26A10Q8NG04 563 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 OR10H5Q8NGA6 315 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 OR51G2Q8NGK0 314 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 OR5M9Q8NGP3 310 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 OR52N1Q8NH53 320 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 CNTNAP3BQ96NU0 1288 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 SFXN3Q9BWM7 321 aa8.99□□□□□ -0.97
USP39-215ENST00000481409 CNTNAP3Q9BZ76 1288 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms