RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 WDFY4Q6ZS81 3184 aa9.84□□□□□ -0.83
VTI1A-204ENST00000480057 WDR87Q6ZQQ6 2873 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 AHCTF1Q8WYP5 2266 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 A0A0J9YW62 118 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 PNMA8CA0A1B0GUJ8 204 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 TVP23AA6NH52 213 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 ARGFXA6NJG6 315 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 ZNF726A6NNF4 738 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 TAF4O00268 1085 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 ZNF593O00488 134 aaPredicted RBP9.83□□□□□ -0.84
VTI1A-204ENST00000480057 TMCC2O75069 709 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 ZNF254O75437 659 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 ZNF432O94892 652 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 GLSO94925 669 aaPredicted RBP9.83□□□□□ -0.84
VTI1A-204ENST00000480057 CDRT1O95170 752 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 HLA-DQA2P01906 255 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 RFPL3SP0C7P2 107 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 PGA4P0DJD7 388 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 PGA3P0DJD8 388 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 ZNF823P16415 610 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 TCEA1P23193 301 aaKnown RBP9.83□□□□□ -0.84
VTI1A-204ENST00000480057 S100A5P33763 92 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 OPRL1P41146 370 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 ETV6P41212 452 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 GDI2P50395 445 aaKnown RBP9.83□□□□□ -0.84
VTI1A-204ENST00000480057 ZNF133P52736 654 aaPredicted RBP9.83□□□□□ -0.84
VTI1A-204ENST00000480057 HCCSP53701 268 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 CLRN1P58418 232 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 ZNF45Q02386 682 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 TOMM20Q15388 145 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 HIST3H3Q16695 136 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 KCTD18Q6PI47 426 aaPredicted RBP9.83□□□□□ -0.84
VTI1A-204ENST00000480057 DEGS2Q6QHC5 323 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 LYPD4Q6UWN0 246 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 TMEM91Q6ZNR0 172 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 YRDCQ86U90 279 aaKnown RBP9.83□□□□□ -0.84
VTI1A-204ENST00000480057 GGNQ86UU5 652 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 TPRA1Q86W33 373 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 GLB1L2Q8IW92 636 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 SULF2Q8IWU5 870 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 OR2V1Q8NHB1 315 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 ABHD4Q8TB40 342 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 SMAP2Q8WU79 429 aaPredicted RBP9.83□□□□□ -0.84
VTI1A-204ENST00000480057 THRSPQ92748 146 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 PNPLA2Q96AD5 504 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 SCMH1Q96GD3 660 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 TXNDC15Q96J42 360 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 ADGRG7Q96K78 797 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 OR8B4Q96RC9 309 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 TIGARQ9NQ88 270 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 ACOXLQ9NUZ1 547 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 MRPL22Q9NWU5 206 aaKnown RBP9.83□□□□□ -0.84
VTI1A-204ENST00000480057 MED29Q9NX70 200 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 MRM2Q9UI43 246 aaKnown RBP9.83□□□□□ -0.84
VTI1A-204ENST00000480057 COA3Q9Y2R0 106 aaPredicted RBP9.83□□□□□ -0.84
VTI1A-204ENST00000480057 KLHDC2Q9Y2U9 406 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 DMDP11532 3685 aa9.83□□□□□ -0.84
VTI1A-204ENST00000480057 TRBV2A0A0J9YWF9 115 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 SLC35F4A4IF30 521 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 PINLYPA6NC86 204 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 ZNF814B7Z6K7 855 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 TMEM127O75204 238 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 UPK3AO75631 287 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 TRAPPC6AO75865 159 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 POU3F2P20265 443 aaPredicted RBP9.82□□□□□ -0.84
VTI1A-204ENST00000480057 ENPP1P22413 925 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 EDNRAP25101 427 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 CD40LGP29965 261 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 CD97P48960 835 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 CCR9P51686 369 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 SUCLG1P53597 346 aaKnown RBP9.82□□□□□ -0.84
VTI1A-204ENST00000480057 CARD18P57730 90 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 ADAM8P78325 824 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 SLC3A1Q07837 685 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 DBPQ10586 325 aaPredicted RBP9.82□□□□□ -0.84
VTI1A-204ENST00000480057 SLC17A1Q14916 467 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 BCL2A1Q16548 175 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 KCNMB1Q16558 191 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 YIF1BQ5BJH7 314 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 HBMQ6B0K9 141 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 ZNF544Q6NX49 715 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 SLC25A47Q6Q0C1 308 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 IGFL2Q6UWQ7 119 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 UNQ9370/PRO34162Q6UXP9 181 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 LINC00696Q6ZRV3 163 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 CREB3L2Q70SY1 520 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 DPY19L4Q7Z388 723 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 ZNF679Q8IYX0 411 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 MFSD4AQ8N468 514 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 ZFP62Q8NB50 900 aaPredicted RBP9.82□□□□□ -0.84
VTI1A-204ENST00000480057 TMEM178AQ8NBL3 297 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 NEIL3Q8TAT5 605 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 GHSRQ92847 366 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 TMEM54Q969K7 222 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 CPNE4Q96A23 557 aaPredicted RBP9.82□□□□□ -0.84
VTI1A-204ENST00000480057 WDFY2Q96P53 400 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 HDHD5Q9BXW7 423 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 RERGLQ9H628 205 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 ACKR4Q9NPB9 350 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 SNTG1Q9NSN8 517 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms