RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 SMIM11AP58511 58 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 B3GALT5-AS1P59052 145 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 POLR2GP62487 172 aaKnown RBP eCLIP5.53□□□□□ -1.52
SF3B1-209ENST00000479532 CSNK2A1P68400 391 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-209ENST00000479532 HOXC5Q00444 222 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 HSF1Q00613 529 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 RELQ04864 619 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-209ENST00000479532 SRYQ05066 204 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 PRKCDQ05655 676 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 CHRNB3Q05901 458 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 CRYZQ08257 329 aaKnown RBP5.53□□□□□ -1.52
SF3B1-209ENST00000479532 ST3GAL3Q11203 375 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 TNK1Q13470 666 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 RIN1Q13671 783 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 CNN3Q15417 329 aaKnown RBP5.53□□□□□ -1.52
SF3B1-209ENST00000479532 TOMM34Q15785 309 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-209ENST00000479532 TMEM44Q2T9K0 475 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 C4orf46Q504U0 113 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 GPR107Q5VW38 600 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 TMEM211Q6ICI0 200 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 ZNF585AQ6P3V2 769 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 MTFR2Q6P444 385 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 Q6ZPB1 254 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-209ENST00000479532 RRM2BQ7LG56 351 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 AQP12AQ8IXF9 295 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 UBQLNLQ8IYU4 475 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 UBE2J2Q8N2K1 259 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 ATP6V1C2Q8NEY4 427 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 OR6T1Q8NGN1 323 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 OR5M9Q8NGP3 310 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 OR5M1Q8NGP8 315 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 OR14K1Q8NGZ2 314 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 OR2V1Q8NHB1 315 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 FAM57AQ8TBR7 257 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 ZFAND1Q8TCF1 268 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 C3orf49Q96BT1 292 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 SLC41A3Q96GZ6 507 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 PRRC1Q96M27 445 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 KLHL15Q96M94 604 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 HS6ST2Q96MM7 605 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 OR5B2Q96R09 309 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 DMRTA2Q96SC8 542 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 EPYCQ99645 322 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 TIMP4Q99727 224 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 VRK1Q99986 396 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-209ENST00000479532 CHID1Q9BWS9 393 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 TAPBPLQ9BX59 468 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 PRRG4Q9BZD6 226 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 MMP27Q9H306 513 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 CTPS2Q9NRF8 586 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 ALKBH4Q9NXW9 302 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 SPRR3Q9UBC9 169 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 KLHL21Q9UJP4 597 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 OSGIN1Q9UJX0 560 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 MCTS1Q9ULC4 181 aaKnown RBP5.53□□□□□ -1.52
SF3B1-209ENST00000479532 HDGFL3Q9Y3E1 203 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 ZNF337Q9Y3M9 751 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 CHST2Q9Y4C5 530 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 CACNG2Q9Y698 323 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 V9GYQ6 96 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 COL6A6A6NMZ7 2263 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 ZZEF1O43149 2961 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 PCNX3Q9H6A9 2034 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 A0A0B4J2E0 115 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 A0A1B0GWA3 101 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 A0A1B0GX12 115 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 HMX3A6NHT5 357 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 A8MVM7 634 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 B4DXG7 233 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 J3QRK9 145 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 TNFSF11O14788 317 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ADAMDEC1O15204 470 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ARHGEF9O43307 516 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 OR2T1O43869 369 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 OR7A10O76100 309 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 AHSA1O95433 338 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 NTN1O95631 604 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 EPPINO95925 133 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 AMY1AP04745 511 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 GPIP06744 558 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 RAP2AP10114 183 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 PRG2P13727 222 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF708P17019 499 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF182P17025 639 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-209ENST00000479532 TNFRSF1BP20333 461 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ATP6V1B2P21281 511 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 GNLYP22749 145 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ACVR2AP27037 513 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 CAPGP40121 348 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 RBM34P42696 430 aaKnown RBP5.52□□□□□ -1.53
SF3B1-209ENST00000479532 CA7P43166 264 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 HOXA1P49639 335 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-209ENST00000479532 LHX2P50458 406 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF136P52737 540 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 CRYBA2P53672 197 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 CARD18P57730 90 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 RAB1AP62820 205 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 FLI1Q01543 452 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-209ENST00000479532 CD300CQ08708 224 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 PMS2P3Q13401 168 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms