RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 VNN3Q9NY84 501 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 CRNNQ9UBG3 495 aaPredicted RBP17.87■□□□□ 0.45
VARS-224ENST00000479051 IL20RAQ9UHF4 553 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 FBXL3Q9UKT7 428 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 IER3IP1Q9Y5U9 82 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 LRBAP50851 2863 aa17.87■□□□□ 0.45
VARS-224ENST00000479051 SLC2A10O95528 541 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 RAB36O95755 333 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 HLA-HP01893 362 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 CRYAAP02489 173 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 FXYD6P3P58550 94 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 GSG1Q2KHT4 349 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 ZNF620Q6ZNG0 422 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 MDP1Q86V88 176 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 GIPC3Q8TF64 312 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 NSMAFQ92636 917 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 PIGTQ969N2 578 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 NMD3Q96D46 503 aaKnown RBP17.86■□□□□ 0.45
VARS-224ENST00000479051 SAMD8Q96LT4 415 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 ERMAPQ96PL5 475 aaPredicted RBP17.86■□□□□ 0.45
VARS-224ENST00000479051 CCL19Q99731 98 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 IFT27Q9BW83 186 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 DNAJB9Q9UBS3 223 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 ITGB1BP2Q9UKP3 347 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 CDH10Q9Y6N8 788 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 POLQO75417 2590 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 TEX15Q9BXT5 2789 aa17.86■□□□□ 0.45
VARS-224ENST00000479051 IGHV1-18A0A0C4DH31 117 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 PRSS37A4D1T9 235 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 ARRDC5A6NEK1 342 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 SHISA9B4DS77 424 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 IMPA2O14732 288 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 ATE1O95260 518 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 PPP1R3DO95685 299 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 TXNDC12O95881 172 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 GASTP01350 101 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 IGKV3-15P01624 115 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 IGLV1-44P01699 117 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 NOS3P29474 1203 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 IDH3GP51553 393 aaPredicted RBP17.85■□□□□ 0.45
VARS-224ENST00000479051 ARHGDIAP52565 204 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 IST1P53990 364 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 MRPS34P82930 218 aaKnown RBP17.85■□□□□ 0.45
VARS-224ENST00000479051 FMODQ06828 376 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 NPRL3Q12980 569 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 SLC36A2Q495M3 483 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 MESTQ5EB52 335 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 ZNF770Q6IQ21 691 aaPredicted RBP17.85■□□□□ 0.45
VARS-224ENST00000479051 SLC25A47Q6Q0C1 308 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 IL17RDQ8NFM7 739 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 RASD2Q96D21 266 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 MBD6Q96DN6 1003 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 DGCR6LQ9BY27 220 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 FAIMQ9NVQ4 179 aa17.85■□□□□ 0.45
VARS-224ENST00000479051 AKAP6Q13023 2319 aa17.84■□□□□ 0.45
VARS-224ENST00000479051 SOCS2O14508 198 aa17.84■□□□□ 0.45
VARS-224ENST00000479051 ARPC3O15145 178 aa17.84■□□□□ 0.45
VARS-224ENST00000479051 IDH3BO43837 385 aa17.84■□□□□ 0.45
VARS-224ENST00000479051 DEAF1O75398 565 aaPredicted RBP17.84■□□□□ 0.45
VARS-224ENST00000479051 CECR9P0C854 216 aa17.84■□□□□ 0.45
VARS-224ENST00000479051 PTDSS1P48651 473 aaKnown RBP17.84■□□□□ 0.45
VARS-224ENST00000479051 PIGFQ07326 219 aa17.84■□□□□ 0.45
VARS-224ENST00000479051 TMEM53Q6P2H8 277 aa17.84■□□□□ 0.45
VARS-224ENST00000479051 RASSF6Q6ZTQ3 369 aa17.84■□□□□ 0.45
VARS-224ENST00000479051 SLC16A14Q7RTX9 510 aa17.84■□□□□ 0.45
VARS-224ENST00000479051 JAZF1Q86VZ6 243 aa17.84■□□□□ 0.45
VARS-224ENST00000479051 SKA3Q8IX90 412 aa17.84■□□□□ 0.45
VARS-224ENST00000479051 GTPBP3Q969Y2 492 aaKnown RBP17.84■□□□□ 0.45
VARS-224ENST00000479051 SIAEQ9HAT2 523 aa17.84■□□□□ 0.45
VARS-224ENST00000479051 B3GNT2Q9NY97 397 aa17.84■□□□□ 0.45
VARS-224ENST00000479051 CISD1Q9NZ45 108 aaKnown RBP17.84■□□□□ 0.45
VARS-224ENST00000479051 ATP23Q9Y6H3 246 aa17.84■□□□□ 0.45
VARS-224ENST00000479051 PDZD2O15018 2839 aa17.84■□□□□ 0.45
VARS-224ENST00000479051 SLC22A23A1A5C7 686 aa17.83■□□□□ 0.44
VARS-224ENST00000479051 H7C1C5 153 aa17.83■□□□□ 0.44
VARS-224ENST00000479051 TMCC2O75069 709 aa17.83■□□□□ 0.44
VARS-224ENST00000479051 CD53P19397 219 aa17.83■□□□□ 0.44
VARS-224ENST00000479051 LCN6P62502 163 aa17.83■□□□□ 0.44
VARS-224ENST00000479051 RAB1AP62820 205 aa17.83■□□□□ 0.44
VARS-224ENST00000479051 SPOCK1Q08629 439 aa17.83■□□□□ 0.44
VARS-224ENST00000479051 COX10Q12887 443 aa17.83■□□□□ 0.44
VARS-224ENST00000479051 CLDN22Q8N7P3 220 aa17.83■□□□□ 0.44
VARS-224ENST00000479051 LILRB1Q8NHL6 650 aaPredicted RBP17.83■□□□□ 0.44
VARS-224ENST00000479051 TMEM171Q8WVE6 324 aa17.83■□□□□ 0.44
VARS-224ENST00000479051 SLCO4A1Q96BD0 722 aa17.83■□□□□ 0.44
VARS-224ENST00000479051 SH3GL3Q99963 347 aa17.83■□□□□ 0.44
VARS-224ENST00000479051 EGLN3Q9H6Z9 239 aa17.83■□□□□ 0.44
VARS-224ENST00000479051 RNF121Q9H920 327 aa17.83■□□□□ 0.44
VARS-224ENST00000479051 SEC61A2Q9H9S3 476 aa17.83■□□□□ 0.44
VARS-224ENST00000479051 ZNF556Q9HAH1 456 aa17.83■□□□□ 0.44
VARS-224ENST00000479051 TBC1D23Q9NUY8 699 aa17.83■□□□□ 0.44
VARS-224ENST00000479051 BEX4Q9NWD9 120 aaPredicted RBP17.83■□□□□ 0.44
VARS-224ENST00000479051 PDP1Q9P0J1 537 aaPredicted RBP17.83■□□□□ 0.44
VARS-224ENST00000479051 A0A1W2PPL8 197 aa17.82■□□□□ 0.44
VARS-224ENST00000479051 ZNF503-AS2A6NEH8 195 aa17.82■□□□□ 0.44
VARS-224ENST00000479051 ATP6V1G2-DDX39BF2Z307 99 aa17.82■□□□□ 0.44
VARS-224ENST00000479051 RENP00797 406 aa17.82■□□□□ 0.44
VARS-224ENST00000479051 FCGR1AP12314 374 aa17.82■□□□□ 0.44
VARS-224ENST00000479051 GIPRP48546 466 aa17.82■□□□□ 0.44
VARS-224ENST00000479051 NAAAQ02083 359 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms