RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 NPIPB4C9JG80 1138 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 OR7A10O76100 309 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 LCKP06239 509 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 ANPEPP15144 967 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 DRD4P21917 467 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 CCNIQ14094 377 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 SELPLGQ14242 412 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 TAF11Q15544 211 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 KRTAP24-1Q3LI83 254 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 FAM209AQ5JX71 171 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 ARFGEF3Q5TH69 2177 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 NANOGP8Q6NSW7 305 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 DEF8Q6ZN54 512 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 CARM1Q86X55 608 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 C1orf174Q8IYL3 243 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 ZNF519Q8TB69 540 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 SYNPRQ8TBG9 265 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 LZICQ8WZA0 190 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 SH3GL3Q99963 347 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 NANOGQ9H9S0 305 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 HINT3Q9NQE9 182 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 GID8Q9NWU2 228 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 AP3M1Q9Y2T2 418 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 MED31Q9Y3C7 131 aa12.41□□□□□ -0.42
SMARCE1-209ENST00000478349 MRASO14807 208 aa12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 LYPD3O95274 346 aa12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 RPL18Q07020 188 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 ELFN2Q5R3F8 820 aa12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 FAM205BPQ63HN1 556 aa12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 LRFN4Q6PJG9 635 aa12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 RBM45Q8IUH3 476 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 LRRC17Q8N6Y2 441 aa12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 CPEB3Q8NE35 698 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 OR51F2Q8NH61 342 aa12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 TMEM239Q8WW34 195 aa12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 MCHR2Q969V1 340 aa12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 LRRC58Q96CX6 371 aa12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 NDEL1Q9GZM8 345 aa12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 SIAEQ9HAT2 523 aa12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 NKIRAS2Q9NYR9 191 aa12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 TAAR3PQ9P1P4 343 aa12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 EIF3KQ9UBQ5 218 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-209ENST00000478349 A0A0A6YYJ9 748 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 C17orf100A8MU93 164 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 TPD52L2O43399 206 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 PPIHO43447 177 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 HPXP02790 462 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 THY1P04216 161 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 F13BP05160 661 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 MSMBP08118 114 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 FAM157BP0CG42 384 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 ZNF250P15622 560 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 ACADSP16219 412 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 FUT1P19526 365 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 TCN1P20061 433 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 GCH1P30793 250 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 MRPS34P82930 218 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 CD47Q08722 323 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 ST3GAL3Q11203 375 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 MAD2L1BPQ15013 274 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 TRIP10Q15642 601 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 HIST3H3Q16695 136 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 ZMAT1Q5H9K5 638 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 C10orf128Q5T292 105 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 RINLQ6ZS11 566 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 ARPINQ7Z6K5 226 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 ZNF584Q8IVC4 421 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 ICA1LQ8NDH6 482 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 OR4D11Q8NGI4 311 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 ASB10Q8WXI3 467 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 RAB39BQ96DA2 213 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 TIMD4Q96H15 378 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 SEPHS2Q99611 448 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 SOX7Q9BT81 388 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 TMEM120AQ9BXJ8 343 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 MEPEQ9NQ76 525 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 DECR2Q9NUI1 292 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 CGGBP1Q9UFW8 167 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 RIMS3Q9UJD0 308 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 FZR1Q9UM11 496 aa12.39□□□□□ -0.43
SMARCE1-209ENST00000478349 RTTNQ86VV8 2226 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 IGLV3-9A0A075B6K5 115 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 PLSCR5A0PG75 271 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 LYNX1G3V0Z9 82 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 IGFBP1P08833 259 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 PATE4P0C8F1 98 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 LYNX1P0DP58 116 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 NAT2P11245 290 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 IL2RGP31785 369 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 SEC24CP53992 1094 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 UGT2B15P54855 530 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 UCP2P55851 309 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 PCBD1P61457 104 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 ANKDD1AQ495B1 522 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 LRRC23Q53EV4 343 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 RABL3Q5HYI8 236 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 ARL9Q6T311 187 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 LRP11Q86VZ4 500 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 ALDH16A1Q8IZ83 802 aa12.38□□□□□ -0.43
SMARCE1-209ENST00000478349 SYT14Q8NB59 555 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms