RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 NKPD1Q17RQ9 610 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 PCGF3Q3KNV8 242 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 C10orf128Q5T292 105 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 USP43Q70EL4 1123 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 CPEB3Q8NE35 698 aaKnown RBP11.17□□□□□ -0.62
MRPL55-228ENST00000476267 NOXO1Q8NFA2 376 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 VANGL1Q8TAA9 524 aaPredicted RBP11.17□□□□□ -0.62
MRPL55-228ENST00000476267 SYNPRQ8TBG9 265 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 LRRC8CQ8TDW0 803 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 ASB10Q8WXI3 467 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 NABP1Q96AH0 204 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 NMD3Q96D46 503 aaKnown RBP11.17□□□□□ -0.62
MRPL55-228ENST00000476267 ZNF347Q96SE7 839 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 CGREF1Q99674 301 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 TMPRSS13Q9BYE2 586 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 PLA2G12AQ9BZM1 189 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 OCEL1Q9H607 264 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 ZNF665Q9H7R5 613 aa11.17□□□□□ -0.62
MRPL55-228ENST00000476267 TMEM89A2RUT3 159 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 CDC14BO60729 498 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 BCL10O95999 233 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 IGF2P01344 180 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 IGHG1P01857 330 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 RPL18Q07020 188 aaKnown RBP11.16□□□□□ -0.62
MRPL55-228ENST00000476267 CYP51A1Q16850 503 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 TBC1D28Q2M2D7 210 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 SLC36A2Q495M3 483 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 AVPI1Q5T686 147 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 TMEM53Q6P2H8 277 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 C12orf54Q6X4T0 127 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 CCDC80Q76M96 950 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 SLC16A14Q7RTX9 510 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 PATL1Q86TB9 770 aaKnown RBP11.16□□□□□ -0.62
MRPL55-228ENST00000476267 SLC30A8Q8IWU4 369 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 LIPHQ8WWY8 451 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 BCL2L14Q9BZR8 327 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 OR51B6Q9H340 312 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 CDH20Q9HBT6 801 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 SLCO1C1Q9NYB5 712 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 NDUFAF1Q9Y375 327 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 UGT2A1Q9Y4X1 527 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 CACNG2Q9Y698 323 aa11.16□□□□□ -0.62
MRPL55-228ENST00000476267 LOC105371242A0A075B767 164 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 IGKV1D-43A0A0B4J1Z2 117 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 IGHV1-69-2A0A0G2JMI3 117 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 PLPP2O43688 288 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 MGRN1O60291 552 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 TRMUO75648 421 aaKnown RBP11.15□□□□□ -0.62
MRPL55-228ENST00000476267 FSHBP01225 129 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 IGHV2-5P01817 119 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 MT-ND1P03886 318 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 F13BP05160 661 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 LCKP06239 509 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 EPHA1P21709 976 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 WNT5AP41221 380 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 RAD52P43351 418 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 MMP15P51511 669 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 MRPS34P82930 218 aaKnown RBP11.15□□□□□ -0.62
MRPL55-228ENST00000476267 TUSC1Q2TAM9 212 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 ARMC4Q5T2S8 1044 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 ACSM5Q6NUN0 579 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 FAHD2BQ6P2I3 314 aaPredicted RBP11.15□□□□□ -0.62
MRPL55-228ENST00000476267 TMEM154Q6P9G4 183 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 THSD4Q6ZMP0 1018 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 NANOGNBQ7Z5D8 188 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 C1QL2Q7Z5L3 287 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 NKAIN4Q8IVV8 208 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 ZNF101Q8IZC7 436 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 RBM15BQ8NDT2 890 aaKnown RBP11.15□□□□□ -0.62
MRPL55-228ENST00000476267 PFN4Q8NHR9 129 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 ZNF418Q8TF45 676 aaPredicted RBP11.15□□□□□ -0.62
MRPL55-228ENST00000476267 TSPEARQ8WU66 669 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 FAM216AQ8WUB2 273 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 C11orf40Q8WZ69 217 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 FAHD2AQ96GK7 314 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 RABEP2Q9H5N1 569 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 C20orf141Q9NUB4 165 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 GPR160Q9UJ42 338 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 PCDHB10Q9UN67 800 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 WIPI2Q9Y4P8 454 aa11.15□□□□□ -0.62
MRPL55-228ENST00000476267 MEGF8Q7Z7M0 2845 aa11.14□□□□□ -0.63
MRPL55-228ENST00000476267 LOC100509620A0A075B734 347 aa11.14□□□□□ -0.63
MRPL55-228ENST00000476267 NPIPB13A6NJU9 1138 aa11.14□□□□□ -0.63
MRPL55-228ENST00000476267 NPIPB4C9JG80 1138 aa11.14□□□□□ -0.63
MRPL55-228ENST00000476267 BLOC1S5-TXNDC5H3BN57 136 aa11.14□□□□□ -0.63
MRPL55-228ENST00000476267 ICMTO60725 284 aa11.14□□□□□ -0.63
MRPL55-228ENST00000476267 SLC2A10O95528 541 aa11.14□□□□□ -0.63
MRPL55-228ENST00000476267 PTHP01270 115 aa11.14□□□□□ -0.63
MRPL55-228ENST00000476267 UMPSP11172 480 aa11.14□□□□□ -0.63
MRPL55-228ENST00000476267 ACADSP16219 412 aa11.14□□□□□ -0.63
MRPL55-228ENST00000476267 RBM34P42696 430 aaKnown RBP11.14□□□□□ -0.63
MRPL55-228ENST00000476267 CLRN1P58418 232 aa11.14□□□□□ -0.63
MRPL55-228ENST00000476267 SELENOVP59797 346 aa11.14□□□□□ -0.63
MRPL55-228ENST00000476267 MVKQ03426 396 aa11.14□□□□□ -0.63
MRPL55-228ENST00000476267 SCGB2A2Q13296 93 aa11.14□□□□□ -0.63
MRPL55-228ENST00000476267 VMACQ2NL98 169 aa11.14□□□□□ -0.63
MRPL55-228ENST00000476267 TTMPQ5BVD1 217 aa11.14□□□□□ -0.63
MRPL55-228ENST00000476267 PABPC1L2AQ5JQF8 200 aa11.14□□□□□ -0.63
MRPL55-228ENST00000476267 SHQ1Q6PI26 577 aaKnown RBP11.14□□□□□ -0.63
MRPL55-228ENST00000476267 CALHM3Q86XJ0 350 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms