RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 ZNF682O95780 498 aa11.95□□□□□ -0.5
FAM3A-218ENST00000475657 LGI1O95970 557 aa11.95□□□□□ -0.5
FAM3A-218ENST00000475657 SELENOWP63302 87 aa11.95□□□□□ -0.5
FAM3A-218ENST00000475657 ZP4Q12836 540 aa11.95□□□□□ -0.5
FAM3A-218ENST00000475657 KPNB1Q14974 876 aaKnown RBP11.95□□□□□ -0.5
FAM3A-218ENST00000475657 OR7A5Q15622 319 aa11.95□□□□□ -0.5
FAM3A-218ENST00000475657 OTUD3Q5T2D3 398 aaPredicted RBP11.95□□□□□ -0.5
FAM3A-218ENST00000475657 ZNF836Q6ZNA1 936 aa11.95□□□□□ -0.5
FAM3A-218ENST00000475657 GPAT4Q86UL3 456 aa11.95□□□□□ -0.5
FAM3A-218ENST00000475657 SPATA24Q86W54 205 aa11.95□□□□□ -0.5
FAM3A-218ENST00000475657 C10orf67Q8IYJ2 551 aa11.95□□□□□ -0.5
FAM3A-218ENST00000475657 SLC35B4Q969S0 331 aa11.95□□□□□ -0.5
FAM3A-218ENST00000475657 ZNF385AQ96PM9 386 aaKnown RBP11.95□□□□□ -0.5
FAM3A-218ENST00000475657 PKP2Q99959 881 aa11.95□□□□□ -0.5
FAM3A-218ENST00000475657 DENND2DQ9H6A0 471 aaPredicted RBP11.95□□□□□ -0.5
FAM3A-218ENST00000475657 ZNF665Q9H7R5 613 aa11.95□□□□□ -0.5
FAM3A-218ENST00000475657 CORINQ9Y5Q5 1042 aa11.95□□□□□ -0.5
FAM3A-218ENST00000475657 DHRS12A0PJE2 317 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 CDHR4A6H8M9 788 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 TMEM229AB2RXF0 380 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 CLDN34H7C241 214 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 ZNF208O43345 1280 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 PPIHO43447 177 aaKnown RBP11.94□□□□□ -0.5
FAM3A-218ENST00000475657 RP2O75695 350 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 KRT33AO76009 404 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 RNASE1P07998 156 aaKnown RBP11.94□□□□□ -0.5
FAM3A-218ENST00000475657 UMPSP11172 480 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 PRG2P13727 222 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 CXCR1P25024 350 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 ARR3P36575 388 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 HTR3AP46098 478 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 MAP2K6P52564 334 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 SH3BGRP55822 239 aaPredicted RBP11.94□□□□□ -0.5
FAM3A-218ENST00000475657 EPS8Q12929 822 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 DAG1Q14118 895 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 DUSP7Q16829 419 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 DCAF12L2Q5VW00 463 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 SMYD1Q8NB12 490 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 GPR32P1Q8NGA4 272 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 OR9K2Q8NGE7 335 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 GEMIN6Q8WXD5 167 aaKnown RBP11.94□□□□□ -0.5
FAM3A-218ENST00000475657 YIPF5Q969M3 257 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 RAB39BQ96DA2 213 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 PYURFQ96I23 114 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 RSRC1Q96IZ7 334 aaKnown RBP11.94□□□□□ -0.5
FAM3A-218ENST00000475657 HSH2DQ96JZ2 352 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 GPA33Q99795 319 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 MAGIXQ9H6Y5 334 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 OPN4Q9UHM6 478 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 SLC13A4Q9UKG4 626 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 MMP24Q9Y5R2 645 aa11.94□□□□□ -0.5
FAM3A-218ENST00000475657 DEAF1O75398 565 aaPredicted RBP11.93□□□□□ -0.5
FAM3A-218ENST00000475657 NR4A1P22736 598 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 TUBA1BP68363 451 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 TUBA4AP68366 448 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 HOXC5Q00444 222 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 SNTB2Q13425 540 aaKnown RBP11.93□□□□□ -0.5
FAM3A-218ENST00000475657 IFI44LQ53G44 452 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 TUBA1AQ71U36 451 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 MYPOPQ86VE0 399 aaPredicted RBP11.93□□□□□ -0.5
FAM3A-218ENST00000475657 ZNF440Q8IYI8 595 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 ADGRG5Q8IZF4 528 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 CLIP4Q8N3C7 705 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 FAM86B1Q8N7N1 296 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 SIGLECL1Q8N7X8 197 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 ANKK1Q8NFD2 765 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 C22orf15Q8WYQ4 148 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 DUS3LQ96G46 650 aaKnown RBP11.93□□□□□ -0.5
FAM3A-218ENST00000475657 TPD52L3Q96J77 140 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 ARHGDIGQ99819 225 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 RSPO3Q9BXY4 272 aaPredicted RBP11.93□□□□□ -0.5
FAM3A-218ENST00000475657 MRPL37Q9BZE1 423 aaKnown RBP11.93□□□□□ -0.5
FAM3A-218ENST00000475657 MMP27Q9H306 513 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 NELFAQ9H3P2 528 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 C7orf69Q9H7B7 122 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 NOX3Q9HBY0 568 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 CHST2Q9Y4C5 530 aa11.93□□□□□ -0.5
FAM3A-218ENST00000475657 DNAJC9-AS1A6NH13 148 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 LIPT2A6NK58 231 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 FRS3O43559 492 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 TPST1O60507 370 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 SEMG1P04279 462 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 CELA3BP08861 270 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 ACAA2P42765 397 aaKnown RBP11.92□□□□□ -0.5
FAM3A-218ENST00000475657 GLIPR1L2Q4G1C9 344 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 FAM98BQ52LJ0 330 aaKnown RBP11.92□□□□□ -0.5
FAM3A-218ENST00000475657 TMEM225Q6GV28 225 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 FKBP9P1Q75LS8 142 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 VTCN1Q7Z7D3 282 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 CCDC36Q8IYA8 594 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 KDM8Q8N371 416 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 CANT1Q8WVQ1 401 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 SLC25A28Q96A46 364 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 SLC47A1Q96FL8 570 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 C1orf147Q96MC9 270 aaPredicted RBP11.92□□□□□ -0.5
FAM3A-218ENST00000475657 C1QTNF5Q9BXJ0 243 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 LINC00470Q9BZP3 86 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 PRDM4Q9UKN5 801 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 RYR3Q15413 4870 aa11.92□□□□□ -0.5
FAM3A-218ENST00000475657 A0A096LPE4 126 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms