RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 ANKRD9Q96BM1 317 aaPredicted RBP10.64□□□□□ -0.71
U2AF1-209ENST00000475639 OR7D2Q96RA2 312 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 SMOQ99835 787 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 NPTNQ9Y639 398 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 TMEM269A0A1B0GVZ9 245 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 MEIS3P1A6NDR6 274 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 TMEM88BA6NKF7 163 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 CLDN1O95832 211 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 ZDHHC11BP0C7U3 371 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 HOXC13P31276 330 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 SELENOWP63302 87 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 KIAA0141Q14154 515 aaPredicted RBP10.64□□□□□ -0.71
U2AF1-209ENST00000475639 GSG1Q2KHT4 349 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 OR2G6Q5TZ20 316 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 MANEALQ5VSG8 457 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 VASNQ6EMK4 673 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 HSD17B13Q7Z5P4 300 aaPredicted RBP10.64□□□□□ -0.71
U2AF1-209ENST00000475639 ARRDC2Q8TBH0 407 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 TMEM239Q8WW34 195 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 MUCL1Q96DR8 90 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 CRB3Q9BUF7 120 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 SAP130Q9H0E3 1048 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 OR52A5Q9H2C5 316 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 OBP2BQ9NPH6 170 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 OR14J1Q9UGF5 321 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 INSL5Q9Y5Q6 135 aa10.64□□□□□ -0.71
U2AF1-209ENST00000475639 TMEM82A0PJX8 343 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 PIRO00625 290 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 TAPBPO15533 448 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 PSMB1P20618 241 aaKnown RBP10.63□□□□□ -0.71
U2AF1-209ENST00000475639 PSMB3P49720 205 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 RAB13P51153 203 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 SBSNQ6UWP8 590 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 ZNF687Q8N1G0 1237 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 DOK4Q8TEW6 326 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 HHIPQ96QV1 700 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 SLC25A18Q9H1K4 315 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 RCE1Q9Y256 329 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 RALGAPA2Q2PPJ7 1873 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 SUSD5O60279 629 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 SOD1P00441 154 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 FABP1P07148 127 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 SDC1P18827 310 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 SNRPGP62308 76 aaKnown RBP10.63□□□□□ -0.71
U2AF1-209ENST00000475639 SNTB1Q13884 538 aaKnown RBP10.63□□□□□ -0.71
U2AF1-209ENST00000475639 ADIRFQ15847 76 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 DBX2Q6ZNG2 339 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 SSX7Q7RTT5 188 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 DEFB119Q8N690 84 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 OR11L1Q8NGX0 322 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 ACER3Q9NUN7 267 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 BABAM2Q9NXR7 383 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 GAB2Q9UQC2 676 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 CDHR4A6H8M9 788 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 H7BYZ3 331 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 SCAMP2O15127 329 aaKnown RBP10.63□□□□□ -0.71
U2AF1-209ENST00000475639 DDAH2O95865 285 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 PAX6P26367 422 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 DMWDQ09019 674 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 RBMS2Q15434 407 aaKnown RBP10.63□□□□□ -0.71
U2AF1-209ENST00000475639 SMAD2Q15796 467 aaKnown RBP10.63□□□□□ -0.71
U2AF1-209ENST00000475639 HFEQ30201 348 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 RNLSQ5VYX0 342 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 CLECL1Q8IZS7 167 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 CCNL2Q96S94 520 aaPredicted RBP10.63□□□□□ -0.71
U2AF1-209ENST00000475639 LMF2Q9BU23 707 aaKnown RBP10.63□□□□□ -0.71
U2AF1-209ENST00000475639 C1orf123Q9NWV4 160 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 A0A1W2PP55 124 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 SLC31A2O15432 143 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 SBK2P0C263 348 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 LAMP1P11279 417 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 CPT2P23786 658 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 GABRA2P47869 451 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 LIMS1P48059 325 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 MAP4K2Q12851 820 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 TEAD2Q15562 447 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.63□□□□□ -0.71
U2AF1-209ENST00000475639 FAM162BQ5T6X4 162 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 OGFOD3Q6PK18 319 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 COMMD6Q7Z4G1 85 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 DPPA2Q7Z7J5 298 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 PIANPQ8IYJ0 282 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 OR56B1Q8NGI3 324 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 PIGCQ92535 297 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 KCTD12Q96CX2 325 aaKnown RBP10.63□□□□□ -0.71
U2AF1-209ENST00000475639 MS4A4EQ96PG1 132 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 SEMA4CQ9C0C4 833 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 CHST8Q9H2A9 424 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 SLC23A2Q9UGH3 650 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 TRAPPC2LQ9UL33 140 aa10.63□□□□□ -0.71
U2AF1-209ENST00000475639 EP400Q96L91 3159 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 A6NIN4 97 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 PRICKLE3O43900 615 aaPredicted RBP10.62□□□□□ -0.71
U2AF1-209ENST00000475639 PTTG1IPP53801 180 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 MBTPS1Q14703 1052 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 PLCXD3Q63HM9 321 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 METTL9Q9H1A3 318 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 INPP5EQ9NRR6 644 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 CNIH4Q9P003 139 aa10.62□□□□□ -0.71
U2AF1-209ENST00000475639 BTNL2Q9UIR0 455 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms