RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 SLC22A23A1A5C7 686 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 SCRG1O75711 98 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 DHFRP00374 187 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 ADAM8P78325 824 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 HACD4Q5VWC8 232 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 OR7E24Q6IFN5 339 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 DND1Q8IYX4 353 aaKnown RBP12.67□□□□□ -0.38
UBXN11-214ENST00000475591 DCBLD2Q96PD2 775 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 OR8B4Q96RC9 309 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 TGIF2Q9GZN2 237 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 COMMD4Q9H0A8 199 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 SLITRK2Q9H156 845 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 MED28Q9H204 178 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 SRPK3Q9UPE1 567 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 COA3Q9Y2R0 106 aaPredicted RBP12.67□□□□□ -0.38
UBXN11-214ENST00000475591 TMEM14AQ9Y6G1 99 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 ASCC3Q8N3C0 2202 aaKnown RBP12.67□□□□□ -0.38
UBXN11-214ENST00000475591 TRBV5-7A0A0A0MS05 114 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 TRBV11-1A0A0K0K1C0 115 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 C7orf66A4D0T2 115 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 ANXA2P2A6NMY6 339 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 FTCDNL1E5RQL4 147 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 CTDSPLO15194 276 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 ANXA2P07355 339 aaKnown RBP12.67□□□□□ -0.38
UBXN11-214ENST00000475591 CXCL3P19876 107 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 SLC17A1Q14916 467 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 OR7A5Q15622 319 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 BTBD16Q32M84 506 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 YOD1Q5VVQ6 348 aaPredicted RBP12.67□□□□□ -0.38
UBXN11-214ENST00000475591 LAMTOR1Q6IAA8 161 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 PAPD4Q6PIY7 484 aaKnown RBP12.67□□□□□ -0.38
UBXN11-214ENST00000475591 ZFAND1Q8TCF1 268 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 TSEN15Q8WW01 171 aaKnown RBP12.67□□□□□ -0.38
UBXN11-214ENST00000475591 SEMA4CQ9C0C4 833 aa12.67□□□□□ -0.38
UBXN11-214ENST00000475591 VSX1Q9NZR4 365 aaPredicted RBP12.67□□□□□ -0.38
UBXN11-214ENST00000475591 IGKV1D-43A0A0B4J1Z2 117 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 TMEM212A6NML5 194 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 SIGLEC6O43699 453 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 ALOX12BO75342 701 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 MAPK3P27361 379 aaPredicted RBP12.66□□□□□ -0.38
UBXN11-214ENST00000475591 EPHA8P29322 1005 aaPredicted RBP12.66□□□□□ -0.38
UBXN11-214ENST00000475591 ERP29P30040 261 aaKnown RBP12.66□□□□□ -0.38
UBXN11-214ENST00000475591 CCKBRP32239 447 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 INPP5JQ15735 1006 aaPredicted RBP12.66□□□□□ -0.38
UBXN11-214ENST00000475591 TMEM69Q5SWH9 247 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 BAIAP2L2Q6UXY1 529 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 OR2I1PQ8NGU4 316 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 GPR148Q8TDV2 347 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 GIMAP1Q8WWP7 306 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 WDR77Q9BQA1 342 aaPredicted RBP12.66□□□□□ -0.38
UBXN11-214ENST00000475591 ZNF222Q9UK12 451 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 SIT1Q9Y3P8 196 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 IGLV3-12A0A075B6K2 115 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 IGHV5-10-1A0A0J9YXX1 117 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 MS4A18H0YCH9 400 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 H3BML4 177 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 FABP7O15540 132 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 OPN1LWP04000 364 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 H2AFB2P0C5Z0 115 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 SLC26A5P58743 744 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 C19orf57Q0VDD7 668 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 FOXF1Q12946 379 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 ST3GAL2Q16842 350 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 MS4A18Q3C1V0 323 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 ASPHD2Q6ICH7 369 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 DACT3Q96B18 629 aaPredicted RBP12.66□□□□□ -0.38
UBXN11-214ENST00000475591 OR51J1Q9H342 316 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 HRASLSQ9HDD0 168 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 MED29Q9NX70 200 aa12.66□□□□□ -0.38
UBXN11-214ENST00000475591 CCR9P51686 369 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 EFNB2P52799 333 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 EIF2B1Q14232 305 aaKnown RBP12.65□□□□□ -0.38
UBXN11-214ENST00000475591 NDUFA5Q16718 116 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 GSG1Q2KHT4 349 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 RABEPKQ7Z6M1 372 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 LIX1LQ8IVB5 337 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 ZNF679Q8IYX0 411 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 STK35Q8TDR2 534 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 HAVCR1Q96D42 359 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 NXPE2Q96DL1 559 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 S100A16Q96FQ6 103 aaKnown RBP12.65□□□□□ -0.38
UBXN11-214ENST00000475591 CMTM3Q96MX0 182 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 MNTQ99583 582 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 ABHD6Q9BV23 337 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 NIPAL2Q9H841 368 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 FBXL3Q9UKT7 428 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 RABL2BQ9UNT1 228 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 FREM2Q5SZK8 3169 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 CACNA1EQ15878 2313 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 GABARAPH6UMI1 98 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 CALCBP10092 127 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 IFNGR1P15260 489 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 CSRP1P21291 193 aaKnown RBP12.65□□□□□ -0.38
UBXN11-214ENST00000475591 STOMP27105 288 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 ART1P52961 327 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 FOXK1P85037 733 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 RASGEF1BQ0VAM2 473 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 TNK1Q13470 666 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 LYSMD4Q5XG99 296 aa12.65□□□□□ -0.38
UBXN11-214ENST00000475591 SLC18B1Q6NT16 456 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms