RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 CCDC3Q9BQI4 270 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 TTTY10Q9BZA0 68 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 ACKR4Q9NPB9 350 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 KRCC1Q9NPI7 259 aaPredicted RBP11.82□□□□□ -0.52
CCNL1-216ENST00000475298 C2orf42Q9NWW7 574 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 FLRT3Q9NZU0 649 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 A0A087WV62 115 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 A0A0J9YY10 115 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 UBE2QL1A1L167 161 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 BRINP1O60477 761 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 NGFRP08138 427 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 ST6GAL1P15907 406 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 ABCD3P28288 659 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 PPT1P50897 306 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 FOXK2Q01167 660 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 MPPED2Q15777 294 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 NNATQ16517 81 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 TMEM44Q2T9K0 475 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 RNF44Q7L0R7 432 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 ZNF546Q86UE3 836 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 WDSUB1Q8N9V3 476 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 SLC25A38Q96DW6 304 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 ZDHHC12Q96GR4 267 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 TMEM185BQ9H7F4 350 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 SIGLEC7Q9Y286 467 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 SPACA6W5XKT8 324 aa11.82□□□□□ -0.52
CCNL1-216ENST00000475298 TRAV1-2A0A0B4J238 106 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 PPP1R3DO95685 299 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 SEMA4FO95754 770 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 IGKV1D-16P01601 117 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 MAP3K8P41279 467 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 PTH2RP49190 550 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 HCCSP53701 268 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 STARD6P59095 220 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 FAM53BQ14153 422 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 PEA15Q15121 130 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 TRAM1Q15629 374 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 AMZ1Q400G9 498 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 BEND4Q6ZU67 534 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 TAF8Q7Z7C8 310 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 LNX2Q8N448 690 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 KCNRGQ8N5I3 272 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 PHYHIPLQ96FC7 376 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 DERL3Q96Q80 235 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 STACQ99469 402 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 UFSP2Q9NUQ7 469 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 A0A0D9SG52 128 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 DAPL1A0PJW8 107 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 TGFBR3LH3BV60 316 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 OR10H2O60403 315 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 TNFP01375 233 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 IGHV2-5P01817 119 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 IGHV4-34P06331 123 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 RIDAP52758 137 aaKnown RBP11.81□□□□□ -0.52
CCNL1-216ENST00000475298 CRMP1Q14194 572 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 ERV3-1Q14264 604 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 NDUFAF6Q330K2 333 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 PLEKHN1Q494U1 663 aaPredicted RBP11.81□□□□□ -0.52
CCNL1-216ENST00000475298 GID4Q8IVV7 300 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 GPBAR1Q8TDU6 330 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 FCAMRQ8WWV6 532 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 CTHRC1Q96CG8 243 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 TCF7L1Q9HCS4 588 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 POT1Q9NUX5 634 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 ANKRD10Q9NXR5 420 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 CD207Q9UJ71 328 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 MED31Q9Y3C7 131 aa11.81□□□□□ -0.52
CCNL1-216ENST00000475298 AK6Q9Y3D8 172 aaKnown RBP11.81□□□□□ -0.52
CCNL1-216ENST00000475298 A0A1B0GWA3 101 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 C1orf196B1AJZ1 125 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 PRKNO60260 465 aaPredicted RBP11.8□□□□□ -0.52
CCNL1-216ENST00000475298 OR8U8P0C7N1 319 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 P2RX1P51575 399 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 PSG6Q00889 435 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 TEX30Q5JUR7 227 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 STPG1Q5TH74 334 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 EEF1A1P5Q5VTE0 462 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 ZNF813Q6ZN06 617 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 STX12Q86Y82 276 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 RNF113BQ8IZP6 322 aaKnown RBP11.8□□□□□ -0.52
CCNL1-216ENST00000475298 RFLNBQ8N5W9 214 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 EID2Q8N6I1 236 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 AVL9Q8NBF6 648 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 OR4A4PQ8NGN8 299 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 TNFRSF13CQ96RJ3 184 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 TEAD3Q99594 435 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 SEC11CQ9BY50 192 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 CMC2Q9NRP2 79 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 TREM2Q9NZC2 230 aa11.8□□□□□ -0.52
CCNL1-216ENST00000475298 ZNF230Q9UIE0 474 aaPredicted RBP11.8□□□□□ -0.52
CCNL1-216ENST00000475298 A0A0A6YYC8 382 aaPredicted RBP11.79□□□□□ -0.52
CCNL1-216ENST00000475298 ARGFXA6NJG6 315 aa11.79□□□□□ -0.52
CCNL1-216ENST00000475298 DBX1A6NMT0 343 aa11.79□□□□□ -0.52
CCNL1-216ENST00000475298 I3L1I5 382 aaPredicted RBP11.79□□□□□ -0.52
CCNL1-216ENST00000475298 MAGEB4O15481 346 aaPredicted RBP11.79□□□□□ -0.52
CCNL1-216ENST00000475298 FLRT2O43155 660 aa11.79□□□□□ -0.52
CCNL1-216ENST00000475298 CD63P08962 238 aa11.79□□□□□ -0.52
CCNL1-216ENST00000475298 AGAP20933 346 aa11.79□□□□□ -0.52
CCNL1-216ENST00000475298 EIF2S3P41091 472 aaKnown RBP11.79□□□□□ -0.52
CCNL1-216ENST00000475298 YPEL5P62699 121 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms