RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 B4GALT1P15291 398 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 GIPRP48546 466 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 GALK2Q01415 458 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 CAMK2DQ13557 499 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 GLYATQ6IB77 296 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 FAHD2BQ6P2I3 314 aaPredicted RBP13.4□□□□□ -0.26
SRRT-209ENST00000474896 PGM2L1Q6PCE3 622 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 ULK3Q6PHR2 472 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 NHLRC1Q6VVB1 395 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 THSD4Q6ZMP0 1018 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 ZNF627Q7L945 461 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 COMTD1Q86VU5 262 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 OR6N1Q8NGY5 312 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 SLC26A7Q8TE54 656 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 FAM162AQ96A26 154 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 MCUR1Q96AQ8 359 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 FAHD2AQ96GK7 314 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 SLC41A3Q96GZ6 507 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 DENND2DQ9H6A0 471 aaPredicted RBP13.4□□□□□ -0.26
SRRT-209ENST00000474896 ZNF275Q9NSD4 429 aaPredicted RBP13.4□□□□□ -0.26
SRRT-209ENST00000474896 ZNF224Q9NZL3 707 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 SNX13Q9Y5W8 968 aa13.4□□□□□ -0.26
SRRT-209ENST00000474896 ARPC2O15144 300 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 WIPF1O43516 503 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 TPST1O60507 370 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 GMNNO75496 209 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 RAB36O95755 333 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 IFNA14P01570 189 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 TFP02787 698 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 BGLAPP02818 100 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 CD247P20963 164 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 LMO4P61968 165 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 RPS23P62266 143 aaKnown RBP13.39□□□□□ -0.27
SRRT-209ENST00000474896 ACTG1P63261 375 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 PMS2P3Q13401 168 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 RAB39AQ14964 217 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 DUSP7Q16829 419 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 GLIPR1L2Q4G1C9 344 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 CYBRD1Q53TN4 286 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 SHQ1Q6PI26 577 aaKnown RBP13.39□□□□□ -0.27
SRRT-209ENST00000474896 ASRGL1Q7L266 308 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 BHLHE22Q8NFJ8 381 aaPredicted RBP13.39□□□□□ -0.27
SRRT-209ENST00000474896 GPR32P1Q8NGA4 272 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 OR6S1Q8NH40 331 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 OR51F2Q8NH61 342 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 ZNF418Q8TF45 676 aaPredicted RBP13.39□□□□□ -0.27
SRRT-209ENST00000474896 RASSF5Q8WWW0 418 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 CCDC124Q96CT7 223 aaKnown RBP13.39□□□□□ -0.27
SRRT-209ENST00000474896 SLC47A1Q96FL8 570 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 FOXB1Q99853 325 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 ASPNQ9BXN1 380 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 ULBP2Q9BZM5 246 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 SELENONQ9NZV5 590 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 CORINQ9Y5Q5 1042 aa13.39□□□□□ -0.27
SRRT-209ENST00000474896 SERPINI2O75830 405 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 SERPINA1P01009 418 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 PATE4P0C8F1 98 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 AHCYP23526 432 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 MYBPC1Q00872 1141 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 PUDPQ08623 228 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 SCGB2A2Q13296 93 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 TRIM25Q14258 630 aaKnown RBP13.38□□□□□ -0.27
SRRT-209ENST00000474896 OR1Q1Q15612 314 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 ALKBH6Q3KRA9 238 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 C10orf53Q8N6V4 93 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 C3orf56Q8N813 242 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 SCAIQ8N9R8 606 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 FGFBP3Q8TAT2 258 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 GCDHQ92947 438 aaPredicted RBP13.38□□□□□ -0.27
SRRT-209ENST00000474896 ASB9Q96DX5 294 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 NSMCE2Q96MF7 247 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 MOGAT1Q96PD6 335 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 EPYCQ99645 322 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 MUC13Q9H3R2 512 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 GORASP2Q9H8Y8 452 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 TMEM27Q9HBJ8 222 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 ACTR3BQ9P1U1 418 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 SLC13A4Q9UKG4 626 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 PCDHB10Q9UN67 800 aa13.38□□□□□ -0.27
SRRT-209ENST00000474896 A0A1W2PPW3 197 aa13.37□□□□□ -0.27
SRRT-209ENST00000474896 LRRN3E7EW58 273 aa13.37□□□□□ -0.27
SRRT-209ENST00000474896 PLPP3O14495 311 aa13.37□□□□□ -0.27
SRRT-209ENST00000474896 NCR1O76036 304 aa13.37□□□□□ -0.27
SRRT-209ENST00000474896 UBL3O95164 117 aa13.37□□□□□ -0.27
SRRT-209ENST00000474896 ZNF682O95780 498 aa13.37□□□□□ -0.27
SRRT-209ENST00000474896 EGR1P18146 543 aa13.37□□□□□ -0.27
SRRT-209ENST00000474896 ATP6V1B2P21281 511 aa13.37□□□□□ -0.27
SRRT-209ENST00000474896 COMPP49747 757 aaPredicted RBP13.37□□□□□ -0.27
SRRT-209ENST00000474896 MRPS11P82912 194 aaKnown RBP13.37□□□□□ -0.27
SRRT-209ENST00000474896 MS4A2Q01362 244 aa13.37□□□□□ -0.27
SRRT-209ENST00000474896 ZSCAN26Q16670 478 aa13.37□□□□□ -0.27
SRRT-209ENST00000474896 CBLL1Q75N03 491 aa13.37□□□□□ -0.27
SRRT-209ENST00000474896 PXKQ7Z7A4 578 aa13.37□□□□□ -0.27
SRRT-209ENST00000474896 PEG10Q86TG7 708 aaKnown RBP13.37□□□□□ -0.27
SRRT-209ENST00000474896 ZNF584Q8IVC4 421 aa13.37□□□□□ -0.27
SRRT-209ENST00000474896 SKA3Q8IX90 412 aa13.37□□□□□ -0.27
SRRT-209ENST00000474896 ZNF416Q9BWM5 594 aa13.37□□□□□ -0.27
SRRT-209ENST00000474896 MMADHCQ9H3L0 296 aaPredicted RBP13.37□□□□□ -0.27
SRRT-209ENST00000474896 MRPL39Q9NYK5 338 aaKnown RBP13.37□□□□□ -0.27
SRRT-209ENST00000474896 TAAR3PQ9P1P4 343 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms