RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 PLP2Q04941 152 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 MSMPQ1L6U9 139 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 CYBRD1Q53TN4 286 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 RGS7BPQ6MZT1 257 aaPredicted RBP17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 ARIH2OSQ8N7S6 290 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 OR2T12Q8NG77 320 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 FGFBP3Q8TAT2 258 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 ASB10Q8WXI3 467 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 LZICQ8WZA0 190 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 ZNF347Q96SE7 839 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 KCNN2Q9H2S1 579 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 CDH20Q9HBT6 801 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 DUSP13Q9UII6 198 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 CAPN7Q9Y6W3 813 aa17.5■□□□□ 0.39
PDLIM4-206ENST00000474421 IQCMA0A1B0GVH7 501 aa17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 A0A1W2PPW3 197 aa17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 GMNCA6NCL1 334 aa17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 NPIPB13A6NJU9 1138 aa17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 NPIPB4C9JG80 1138 aa17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 TRMUO75648 421 aaKnown RBP17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 AQP2P41181 271 aa17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 OR1E2P47887 323 aa17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 ZNF133P52736 654 aaPredicted RBP17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 ST3GAL3Q11203 375 aa17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 TBC1D28Q2M2D7 210 aa17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 LRRC23Q53EV4 343 aaPredicted RBP17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 ARPINQ7Z6K5 226 aa17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 LINC01356Q8N9X3 169 aa17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 SYT14Q8NB59 555 aa17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 SNX18Q96RF0 628 aa17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 REPIN1Q9BWE0 567 aaKnown RBP17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 SMURF2Q9HAU4 748 aa17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 C20orf141Q9NUB4 165 aa17.49■□□□□ 0.39
PDLIM4-206ENST00000474421 ELOVL7A1L3X0 281 aa17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 SHOX2O60902 331 aaPredicted RBP17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 SNAP29O95721 258 aa17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 TSPAN19P0C672 248 aa17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 RAD52P43351 418 aa17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 ALDH3B1P43353 468 aa17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 SELENOWP63302 87 aa17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 MRPS11P82912 194 aaKnown RBP17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 RUNX1T1Q06455 604 aa17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 TAF11Q15544 211 aa17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 C10orf128Q5T292 105 aa17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 LRP11Q86VZ4 500 aa17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 PHC2Q8IXK0 858 aa17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 MICU2Q8IYU8 434 aa17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 RBM15BQ8NDT2 890 aaKnown RBP17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 RDH5Q92781 318 aa17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 TPD52L3Q96J77 140 aa17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 BCL2L14Q9BZR8 327 aa17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 SIAEQ9HAT2 523 aa17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 FZR1Q9UM11 496 aa17.48■□□□□ 0.39
PDLIM4-206ENST00000474421 PCMT1P22061 227 aa17.47■□□□□ 0.39
PDLIM4-206ENST00000474421 ACHEP22303 614 aa17.47■□□□□ 0.39
PDLIM4-206ENST00000474421 MRPS34P82930 218 aaKnown RBP17.47■□□□□ 0.39
PDLIM4-206ENST00000474421 MYBPC1Q00872 1141 aa17.47■□□□□ 0.39
PDLIM4-206ENST00000474421 NKPD1Q17RQ9 610 aa17.47■□□□□ 0.39
PDLIM4-206ENST00000474421 ELFN2Q5R3F8 820 aa17.47■□□□□ 0.39
PDLIM4-206ENST00000474421 ARMC4Q5T2S8 1044 aa17.47■□□□□ 0.39
PDLIM4-206ENST00000474421 CGB2Q6NT52 195 aa17.47■□□□□ 0.39
PDLIM4-206ENST00000474421 ZNF519Q8TB69 540 aa17.47■□□□□ 0.39
PDLIM4-206ENST00000474421 C11orf40Q8WZ69 217 aa17.47■□□□□ 0.39
PDLIM4-206ENST00000474421 PRRC1Q96M27 445 aa17.47■□□□□ 0.39
PDLIM4-206ENST00000474421 TXNIPQ9H3M7 391 aa17.47■□□□□ 0.39
PDLIM4-206ENST00000474421 SLCO1C1Q9NYB5 712 aa17.47■□□□□ 0.39
PDLIM4-206ENST00000474421 MYEF2Q9P2K5 600 aaKnown RBP17.47■□□□□ 0.39
PDLIM4-206ENST00000474421 LYNX1G3V0Z9 82 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 FAM157BP0CG42 384 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 LYNX1P0DP58 116 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 ZNF250P15622 560 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 TCN1P20061 433 aaPredicted RBP17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 APLNRP35414 380 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 GPR6P46095 362 aaPredicted RBP17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 SEC24CP53992 1094 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 TMEM33P57088 247 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 KLF3P57682 345 aaPredicted RBP17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 HSF2Q03933 536 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 SF3A3Q12874 501 aaKnown RBP eCLIP17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 MAD2L1BPQ15013 274 aaPredicted RBP17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 MOGQ16653 247 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 CR1LQ2VPA4 569 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 ALG10Q5BKT4 473 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 LRRC18Q8N456 261 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 MOSPD2Q8NHP6 518 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 SYNPRQ8TBG9 265 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 FNDC8Q8TC99 324 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 SNX33Q8WV41 574 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 BPIFA2Q96DR5 249 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 C1orf159Q96HA4 380 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 SOX7Q9BT81 388 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 CCDC134Q9H6E4 229 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 CCNB1IP1Q9NPC3 277 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 HIF3AQ9Y2N7 669 aa17.46■□□□□ 0.39
PDLIM4-206ENST00000474421 HPXP02790 462 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 LCKP06239 509 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 MMP7P09237 267 aaPredicted RBP17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 NAT2P11245 290 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 IL2RGP31785 369 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 CDH15P55291 814 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms