RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 HLA-DPB1P04440 258 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 CCNB1P14635 433 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 FOLR1P15328 257 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 TCN2P20062 427 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 NPY1RP25929 384 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 GDI1P31150 447 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 SEC61GP60059 68 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 RAP1AP62834 184 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 KCNJ2P63252 427 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 REG3AQ06141 175 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 STK11Q15831 433 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 ANKDD1AQ495B1 522 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 CCNJQ5T5M9 372 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 IGFL1Q6UW32 110 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 NBPF5PQ86XG9 351 aaPredicted RBP1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 C15orf56Q8N910 161 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 RHEBL1Q8TAI7 183 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 TM4SF18Q96CE8 201 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 MED8Q96G25 268 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 PDXPQ96GD0 296 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 WFIKKN1Q96NZ8 548 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 NPY6RQ99463 290 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 ZBTB18Q99592 522 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 RARRES2Q99969 163 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 UGT1A7Q9HAW7 530 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 UGT1A10Q9HAW8 530 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 UGT1A8Q9HAW9 530 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 COX16Q9P0S2 106 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 CTSFQ9UBX1 484 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNF639Q9UID6 485 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 CLEC4AQ9UMR7 237 aa1.86□□□□□ -2.11
ECHDC1-213ENST00000474240 IGKV1D-13A0A0B4J2D9 117 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 KIR2DL5BA0A0G2JN68 375 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 KIR2DL5BA0A0G2JPC4 375 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 IGHV5-10-1A0A0J9YXX1 117 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNF705GA8MUZ8 300 aaPredicted RBP1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 FOXH1O75593 365 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 GABARAPO95166 117 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 RCBTB2O95199 551 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 FABP3P05413 133 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 IGKV1-13P0DP09 117 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 ATP1B2P14415 290 aaPredicted RBP1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 MUC1P15941 1255 aaPredicted RBP1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 NCK1P16333 377 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 FOXN2P32314 431 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 SSR4P51571 173 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 NCBP2P52298 156 aaKnown RBP eCLIP1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 KRTAP10-10P60014 251 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 TWF1Q12792 350 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 ECH1Q13011 328 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 IRF4Q15306 451 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 COX19Q49B96 90 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 Q5W150 140 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 CASC1Q6TDU7 716 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 TEX43Q6ZNM6 134 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 HMGN2P46Q86SG4 172 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNF679Q8IYX0 411 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 KIR2DL5AQ8N109 375 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 ZCCHC7Q8N3Z6 543 aaKnown RBP1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 ARL6IP6Q8N6S5 226 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNF615Q8N8J6 731 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 EIF1ADQ8N9N8 165 aaKnown RBP1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 OR4F6Q8NGB9 312 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 OR5W2Q8NH69 310 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 GPR151Q8TDV0 419 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 CXorf40AQ8TE69 158 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 ABHD3Q8WU67 409 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 RSPH1Q8WYR4 309 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 RGP1Q92546 391 aaPredicted RBP1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 FAM3DQ96BQ1 224 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 CNDP1Q96KN2 507 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 CHAC1Q9BUX1 264 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 OSBPL11Q9BXB4 747 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 SLC25A2Q9BXI2 301 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNF282Q9UDV7 671 aaPredicted RBP1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNF222Q9UK12 451 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNFX1Q9P2E3 1918 aaKnown RBP1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 WDR62O43379 1518 aa1.85□□□□□ -2.11
ECHDC1-213ENST00000474240 PLA2R1Q13018 1463 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 C7orf66A4D0T2 115 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 GOSR2O14653 212 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 C1orf105O95561 183 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 NDUFB10O96000 172 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 IL1BP01584 269 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 POLR2MP0CAP2 368 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 ETS2P15036 469 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 TNNI1P19237 187 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 WARSP23381 471 aaKnown RBP1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 HRH1P35367 487 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 CSNK1A1P48729 337 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 CX3CR1P49238 355 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 RORCP51449 518 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 VSX2P58304 361 aaPredicted RBP1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 ACTR1AP61163 376 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 ESRRGP62508 458 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 MRPS22P82650 360 aaKnown RBP1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 PON3Q15166 354 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 ZMYND11Q15326 602 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 SSX2Q16385 188 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 LY6EQ16553 131 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms