RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 PGM2L1Q6PCE3 622 aa16.43■□□□□ 0.22
PTCD3-210ENST00000473829 Q96M85 177 aa16.43■□□□□ 0.22
PTCD3-210ENST00000473829 ALG12Q9BV10 488 aa16.43■□□□□ 0.22
PTCD3-210ENST00000473829 TMUB1Q9BVT8 246 aa16.43■□□□□ 0.22
PTCD3-210ENST00000473829 MAGIXQ9H6Y5 334 aa16.43■□□□□ 0.22
PTCD3-210ENST00000473829 MOV10Q9HCE1 1003 aaKnown RBP16.43■□□□□ 0.22
PTCD3-210ENST00000473829 VNN3Q9NY84 501 aa16.43■□□□□ 0.22
PTCD3-210ENST00000473829 AURKCQ9UQB9 309 aa16.43■□□□□ 0.22
PTCD3-210ENST00000473829 LYVE1Q9Y5Y7 322 aa16.43■□□□□ 0.22
PTCD3-210ENST00000473829 UNC119BA6NIH7 251 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 GYG2O15488 501 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 TMCC2O75069 709 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 NDUFB2O95178 105 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 OR8G3PP0DMU2 310 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 CDAP32320 146 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 PTDSS1P48651 473 aaKnown RBP16.42■□□□□ 0.22
PTCD3-210ENST00000473829 FABP6P51161 128 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 ZNF84P51523 738 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 RAB1AP62820 205 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 HGFACQ04756 655 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 DNAL1Q4LDG9 190 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 FAM205BPQ63HN1 556 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 SLC25A47Q6Q0C1 308 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 MUC15Q8N387 334 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 ARIH2OSQ8N7S6 290 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 OR4C15Q8NGM1 316 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 NANOS1Q8WY41 292 aaKnown RBP16.42■□□□□ 0.22
PTCD3-210ENST00000473829 NSMAFQ92636 917 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 NABP1Q96AH0 204 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 GPX7Q96SL4 187 aaPredicted RBP16.42■□□□□ 0.22
PTCD3-210ENST00000473829 KCNS3Q9BQ31 491 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 SMURF2Q9HAU4 748 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 KRCC1Q9NPI7 259 aaPredicted RBP16.42■□□□□ 0.22
PTCD3-210ENST00000473829 FAIMQ9NVQ4 179 aa16.42■□□□□ 0.22
PTCD3-210ENST00000473829 A6NIZ1 184 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 OR10H3O60404 316 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 NDUFS7O75251 213 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 UBL3O95164 117 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 RAP1BP61224 184 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 RAP1AP62834 184 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 PPP1R8Q12972 351 aaKnown RBP16.41■□□□□ 0.22
PTCD3-210ENST00000473829 BNIP1Q12981 228 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 AGAP6Q5VW22 663 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 SHEQ5VZ18 495 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 ZNF544Q6NX49 715 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 YTHDF3Q7Z739 585 aaKnown RBP16.41■□□□□ 0.22
PTCD3-210ENST00000473829 ZNF584Q8IVC4 421 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 FBXL14Q8N1E6 418 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 OR9Q2Q8NGE9 314 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 RASD2Q96D21 266 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 ZNF570Q96NI8 536 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 BTBD10Q9BSF8 475 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 GRIP2Q9C0E4 1043 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 NRIP3Q9NQ35 241 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 CBLN4Q9NTU7 201 aa16.41■□□□□ 0.22
PTCD3-210ENST00000473829 ACANP16112 2415 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 TEX13CA0A0J9YWL9 993 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 IMPA2O14732 288 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 ARHGEF9O43307 516 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 RAB36O95755 333 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 FPR3P25089 353 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 GSSP48637 474 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 HMGA2P52926 109 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 ATP5J2P56134 94 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 MRPS34P82930 218 aaKnown RBP16.4■□□□□ 0.22
PTCD3-210ENST00000473829 TRAP1Q12931 704 aaKnown RBP16.4■□□□□ 0.22
PTCD3-210ENST00000473829 RAB39AQ14964 217 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 NRN1LQ496H8 165 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 PGBD2Q6P3X8 592 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 SMARCD3Q6STE5 483 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 ADGRG5Q8IZF4 528 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 FANK1Q8TC84 345 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 LRGUKQ96M69 825 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 DLL4Q9NR61 685 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 CA10Q9NS85 328 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 GRHPRQ9UBQ7 328 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 GDF2Q9UK05 429 aaPredicted RBP16.4■□□□□ 0.22
PTCD3-210ENST00000473829 TMCC3Q9ULS5 477 aa16.4■□□□□ 0.22
PTCD3-210ENST00000473829 SLC22A23A1A5C7 686 aa16.39■□□□□ 0.21
PTCD3-210ENST00000473829 TNFRSF11BO00300 401 aa16.39■□□□□ 0.21
PTCD3-210ENST00000473829 FARS2O95363 451 aaKnown RBP16.39■□□□□ 0.21
PTCD3-210ENST00000473829 IGHV4-39P01824 125 aa16.39■□□□□ 0.21
PTCD3-210ENST00000473829 CD99P14209 185 aa16.39■□□□□ 0.21
PTCD3-210ENST00000473829 APOBEC3AP31941 199 aaPredicted RBP16.39■□□□□ 0.21
PTCD3-210ENST00000473829 CHRNB3Q05901 458 aa16.39■□□□□ 0.21
PTCD3-210ENST00000473829 KRR1Q13601 381 aaKnown RBP16.39■□□□□ 0.21
PTCD3-210ENST00000473829 MST1LQ2TV78 715 aa16.39■□□□□ 0.21
PTCD3-210ENST00000473829 FAM98BQ52LJ0 330 aaKnown RBP16.39■□□□□ 0.21
PTCD3-210ENST00000473829 THEM4Q5T1C6 240 aa16.39■□□□□ 0.21
PTCD3-210ENST00000473829 ZNF770Q6IQ21 691 aaPredicted RBP16.39■□□□□ 0.21
PTCD3-210ENST00000473829 C1orf94Q6P1W5 598 aa16.39■□□□□ 0.21
PTCD3-210ENST00000473829 VHLLQ6RSH7 139 aa16.39■□□□□ 0.21
PTCD3-210ENST00000473829 PRSS57Q6UWY2 283 aa16.39■□□□□ 0.21
PTCD3-210ENST00000473829 SLC16A14Q7RTX9 510 aa16.39■□□□□ 0.21
PTCD3-210ENST00000473829 LRRC18Q8N456 261 aa16.39■□□□□ 0.21
PTCD3-210ENST00000473829 Q96MF0 132 aa16.39■□□□□ 0.21
PTCD3-210ENST00000473829 CACNG6Q9BXT2 260 aa16.39■□□□□ 0.21
PTCD3-210ENST00000473829 CADM1Q9BY67 442 aaKnown RBP16.39■□□□□ 0.21
PTCD3-210ENST00000473829 IER3IP1Q9Y5U9 82 aa16.39■□□□□ 0.21
PTCD3-210ENST00000473829 ARFGEF3Q5TH69 2177 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms